RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 CTNND1O60716 968 aaKnown RBP14.18□□□□□ -0.14
CAPN9-203ENST00000366666 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 KLHL40Q2TBA0 621 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 DCAF15Q66K64 600 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 TTBK2Q6IQ55 1244 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 CDC37L1Q7L3B6 337 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 SPICE1Q8N0Z3 855 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 SHISA4Q96DD7 197 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
CAPN9-203ENST00000366666 STX6O43752 255 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 ASNSP08243 561 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 NUCB2P80303 420 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 CCDC173Q0VFZ6 552 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 SUPT20HL1Q3ZLR7 823 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 KLRF2D3W0D1 207 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 F5H6K3 240 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 BRD1O95696 1058 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 PARP1P09874 1014 aaKnown RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 KLRC3Q07444 240 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 PKN1Q16512 942 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 PPP1R9BQ96SB3 815 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 RBM28Q9NW13 759 aaKnown RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 MTMR6Q9Y217 621 aa14.17□□□□□ -0.14
CAPN9-203ENST00000366666 V9GY48 417 aaPredicted RBP14.17□□□□□ -0.14
CAPN9-203ENST00000366666 NDUFB10O96000 172 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 SLC16A2P36021 539 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 HMGN5P82970 282 aaKnown RBP14.16□□□□□ -0.14
CAPN9-203ENST00000366666 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
CAPN9-203ENST00000366666 FOXD4L6Q3SYB3 417 aaPredicted RBP14.16□□□□□ -0.14
CAPN9-203ENST00000366666 FOXD4L3Q6VB84 417 aaPredicted RBP14.16□□□□□ -0.14
CAPN9-203ENST00000366666 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
CAPN9-203ENST00000366666 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 SLFN13Q68D06 897 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 FERMT3Q86UX7 667 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
CAPN9-203ENST00000366666 SMCHD1A6NHR9 2005 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 CDKL5O76039 1030 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 PTPRAP18433 802 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 KIF5BP33176 963 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 VGLL4Q14135 290 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 CPLX2Q6PUV4 134 aaKnown RBP14.15□□□□□ -0.14
CAPN9-203ENST00000366666 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
CAPN9-203ENST00000366666 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 VAT1LQ9HCJ6 419 aa14.15□□□□□ -0.14
CAPN9-203ENST00000366666 CCDC96Q2M329 555 aa14.15□□□□□ -0.15
CAPN9-203ENST00000366666 HOOK2Q96ED9 719 aa14.15□□□□□ -0.15
CAPN9-203ENST00000366666 RNF26Q9BY78 433 aaPredicted RBP14.15□□□□□ -0.15
CAPN9-203ENST00000366666 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.15
CAPN9-203ENST00000366666 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.15
CAPN9-203ENST00000366666 SNCAIPQ9Y6H5 919 aa14.15□□□□□ -0.15
CAPN9-203ENST00000366666 PTPRFP10586 1907 aa14.14□□□□□ -0.15
CAPN9-203ENST00000366666 STK36Q9NRP7 1315 aa14.14□□□□□ -0.15
CAPN9-203ENST00000366666 ZSCAN22P10073 491 aaPredicted RBP14.14□□□□□ -0.15
CAPN9-203ENST00000366666 SLC1A4P43007 532 aa14.14□□□□□ -0.15
CAPN9-203ENST00000366666 GMCL1P1Q8NEA9 526 aa14.14□□□□□ -0.15
CAPN9-203ENST00000366666 PRPF3O43395 683 aaKnown RBP14.13□□□□□ -0.15
CAPN9-203ENST00000366666 ZNF445P59923 1031 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 SPP2Q13103 211 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 FAM173BQ6P4H8 233 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 KCNJ14Q9UNX9 436 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
CAPN9-203ENST00000366666 ZHX2Q9Y6X8 837 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
CAPN9-203ENST00000366666 DEXIO95424 95 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 NASPP49321 788 aaPredicted RBP14.13□□□□□ -0.15
CAPN9-203ENST00000366666 SNAP25P60880 206 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 MTMR2Q13614 643 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 ASPRV1Q53RT3 343 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 LDHDQ86WU2 507 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 GPKOWQ92917 476 aaPredicted RBP eCLIP14.13□□□□□ -0.15
CAPN9-203ENST00000366666 C8orf76Q96K31 380 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
CAPN9-203ENST00000366666 TRIM75PA6NK02 468 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 TTLL12Q14166 644 aaPredicted RBP14.12□□□□□ -0.15
CAPN9-203ENST00000366666 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 TYW1BQ6NUM6 668 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 ADGRF4Q8IZF3 695 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 PIGSQ96S52 555 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 FEZ1Q99689 392 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms