RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 IGFBP4P22692 258 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 GUCY1A2P33402 732 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 MCAMP43121 646 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 GSTO1P78417 241 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 DSG2Q14126 1118 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 KIAA1755Q5JYT7 1200 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 ANKRD33Q7Z3H0 272 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 DPP9Q86TI2 863 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 FOXP4Q8IVH2 680 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 KIAA1683Q9H0B3 1180 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 DHX36Q9H2U1 1008 aaKnown RBP10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 NKX2-4Q9H2Z4 354 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 RAI14Q9P0K7 980 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 TBX21Q9UL17 535 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 IVNS1ABPQ9Y6Y0 642 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 ZNF236Q9UL36 1845 aa10.49□□□□□ -0.73
HMGB1P39-201ENST00000366304 TCF20Q9UGU0 1960 aaKnown RBP10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 FAM86C2PA6NEL3 165 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 TIMP1P01033 207 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 LDHCP07864 332 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 ACRP10323 421 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 CSF2RAP15509 400 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 ERCC3P19447 782 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 DYNLL1P63167 89 aaKnown RBP10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 FOXK1P85037 733 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 CRACR2BQ8N4Y2 399 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 COPRSQ9NQ92 184 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 XPNPEP3Q9NQH7 507 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 PLXNA1Q9UIW2 1896 aa10.48□□□□□ -0.73
HMGB1P39-201ENST00000366304 A0A1W2PRG0 241 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 MYADML2A6NDP7 307 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 ADAMTS4O75173 837 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 MYOGP15173 224 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 PPP4CP60510 307 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 CCDC129Q6ZRS4 1044 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 SLC44A5Q8NCS7 719 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 FEZ1Q99689 392 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 SPATC1LQ9H0A9 340 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 GINM1Q9NU53 330 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
HMGB1P39-201ENST00000366304 ZNF865P0CJ78 1059 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 ARID4AP29374 1257 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 MVPQ14764 893 aaKnown RBP10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 RAB3GAP1Q15042 981 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 CCSAPQ6IQ19 270 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 MFSD5Q6N075 450 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 MICALL1Q8N3F8 863 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 VWCEQ96DN2 955 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 NEUROD6Q96NK8 337 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 CD320Q9NPF0 282 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 PTPRCP08575 1304 aa10.46□□□□□ -0.73
HMGB1P39-201ENST00000366304 A0A0G2JMZ2 1700 aa10.46□□□□□ -0.74
HMGB1P39-201ENST00000366304 RFXAPO00287 272 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 STRNO43815 780 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 PGK2P07205 417 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 CDK7P50613 346 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 ACLYP53396 1101 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 RABGGTBP53611 331 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 KRT40Q6A162 431 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 SHCBP1Q8NEM2 672 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 TOX2Q96NM4 488 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 HCN4Q9Y3Q4 1203 aa10.45□□□□□ -0.74
HMGB1P39-201ENST00000366304 UMODL1Q5DID0 1318 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 MYO9BQ13459 2157 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 EPOPA6NHQ4 379 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 ADCY6O43306 1168 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 TLL1O43897 1013 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 RARBP10826 455 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 PDE4AP27815 886 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 SHMT1P34896 483 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 NAA16Q6N069 864 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 KLHDC9Q8NEP7 349 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 MEIS3Q99687 375 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 PIH1D3Q9NQM4 214 aaKnown RBP10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 SMCHD1A6NHR9 2005 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 FOCADQ5VW36 1801 aa10.44□□□□□ -0.74
HMGB1P39-201ENST00000366304 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 ZNF521Q96K83 1311 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms