RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 TFAP4Q01664 338 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 ALX1Q15699 326 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 MB21D1Q8N884 522 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 NEDD1Q8NHV4 660 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 MOV10L1Q9BXT6 1211 aaKnown RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 PAK6Q9NQU5 681 aaPredicted RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 IVNS1ABPQ9Y6Y0 642 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 SLC15A5A6NIM6 579 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 F5H6K3 240 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 TTLL1O95922 423 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 FGAP02671 866 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
YBX3-203ENST00000366286 PTPREP23469 700 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 KLRC3Q07444 240 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 MAP2K5Q13163 448 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 GRB14Q14449 540 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 PLS1Q14651 629 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 CCL14Q16627 93 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
YBX3-203ENST00000366286 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.44
YBX3-203ENST00000366286 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
YBX3-203ENST00000366286 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 VWA5AO00534 786 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 SGPL1O95470 568 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
YBX3-203ENST00000366286 ERCC3P19447 782 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
YBX3-203ENST00000366286 HAND2P61296 217 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 TTC22Q5TAA0 569 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 CWC27Q6UX04 472 aaKnown RBP12.29□□□□□ -0.44
YBX3-203ENST00000366286 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
YBX3-203ENST00000366286 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
YBX3-203ENST00000366286 HIP1O00291 1037 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 ORC4O43929 436 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
YBX3-203ENST00000366286 NMT2O60551 498 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 ADORA2AP29274 412 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
YBX3-203ENST00000366286 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 NPLOC4Q8TAT6 608 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 MKL1Q969V6 931 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
YBX3-203ENST00000366286 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
YBX3-203ENST00000366286 MCM3APO60318 1980 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 RPTORQ8N122 1335 aa12.28□□□□□ -0.44
YBX3-203ENST00000366286 LCTP09848 1927 aa12.27□□□□□ -0.44
YBX3-203ENST00000366286 FARP2O94887 1054 aaPredicted RBP12.27□□□□□ -0.45
YBX3-203ENST00000366286 HOXC6P09630 235 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 FGRP09769 529 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
YBX3-203ENST00000366286 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
YBX3-203ENST00000366286 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 UBE2Q1Q7Z7E8 422 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 TBC1D10CQ8IV04 446 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 CRISPLD2Q9H0B8 497 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 IL25Q9H293 177 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 MROH8Q9H579 483 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 TOMM22Q9NS69 142 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 MYH6P13533 1939 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.45
YBX3-203ENST00000366286 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 STRNO43815 780 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 SLC25A27O95847 323 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
YBX3-203ENST00000366286 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
YBX3-203ENST00000366286 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 RASGRP2Q7LDG7 609 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 STAG1Q8WVM7 1258 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
YBX3-203ENST00000366286 NEDD4P46934 1319 aa12.26□□□□□ -0.45
YBX3-203ENST00000366286 COBLO75128 1261 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 BMP3P12645 472 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 COPB2P35606 906 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 STAT3P40763 770 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 NOVP48745 357 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 MFSD14CQ5VZR4 134 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms