RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 UBOX5O94941 541 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 PDIA4P13667 645 aaKnown RBP4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 ADGRF1Q5T601 910 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 WAPLQ7Z5K2 1190 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 ENOX1Q8TC92 643 aaKnown RBP4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 FOXP3Q9BZS1 431 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 GMIPQ9P107 970 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZMYM5Q9UJ78 669 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 PCDHB14Q9Y5E9 798 aa4.39□□□□□ -1.71
RNU4-42P-201ENST00000364738 SSU72P8A0A1W2PR75 194 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 OR14I1A6ND48 311 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SLC22A31A6NKX4 558 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 POLR2BP30876 1174 aaKnown RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 PCBP3P57721 371 aaKnown RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SLC14A2Q15849 920 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 OVOS1Q6IE37 1185 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 FBXL19Q6PCT2 694 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 CEP128Q6ZU80 1094 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 ERMP1Q7Z2K6 904 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 TMC3Q7Z5M5 1100 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SIRT2Q8IXJ6 389 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF655Q8N720 491 aaPredicted RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SHISA4Q96DD7 197 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 VWCEQ96DN2 955 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 MAP6Q96JE9 813 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SGPP1Q9BX95 441 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 LRRC3Q9BY71 257 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF552Q9H707 407 aaPredicted RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 BRMS1Q9HCU9 246 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 RAPGEFL1Q9UHV5 662 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 TCFL5Q9UL49 500 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 CNOT6Q9ULM6 557 aaKnown RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF281Q9Y2X9 895 aa4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 SUPT16HQ9Y5B9 1047 aaKnown RBP4.38□□□□□ -1.71
RNU4-42P-201ENST00000364738 NOTOA8MTQ0 251 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 RFXAPO00287 272 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 FKTNO75072 461 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 EFEMP2O95967 443 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 SYPP08247 313 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 EIF4A3P38919 411 aaKnown RBP4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 NBPF9Q3BBW0 867 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 NLRX1Q86UT6 975 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 DAGLBQ8NCG7 672 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 TCTN2Q96GX1 697 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 GCM1Q9NP62 436 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 NCANO14594 1321 aa4.37□□□□□ -1.71
RNU4-42P-201ENST00000364738 TMEM82A0PJX8 343 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 B8ZZF3 427 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 PRRG2O14669 202 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 NRDCO43847 1150 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 CLEC3AO75596 197 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 PRAMEF1O95521 474 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 ERCC3P19447 782 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 KIR2DL1P43626 348 aaPredicted RBP4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 KIR2DL2P43627 348 aaPredicted RBP4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 CRKP46108 304 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 CTSWP56202 376 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 RAD51AP2Q09MP3 1159 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 CCDC27Q2M243 656 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 BBS9Q3SYG4 887 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 NBPF12Q5TAG4 269 aaPredicted RBP4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 TCERG1LQ5VWI1 586 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 USHBP1Q8N6Y0 703 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 LINC00116Q8NCU8 138 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 HHIPL1Q96JK4 782 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF512BQ96KM6 892 aaPredicted RBP4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 KCNQ5Q9NR82 932 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 GGT7Q9UJ14 662 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 KCTD3Q9Y597 815 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 ROBO2Q9HCK4 1378 aa4.36□□□□□ -1.71
RNU4-42P-201ENST00000364738 SIGLEC6O43699 453 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 GREM1O60565 184 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 ATE1O95260 518 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 BMP7P18075 431 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 APOBRQ0VD83 1088 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 SSPNQ14714 243 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 SEZ6Q53EL9 994 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF385BQ569K4 471 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 CDCP2Q5VXM1 449 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZPBP2Q6X784 338 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 GK5Q6ZS86 529 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 HS2ST1Q7LGA3 356 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 NLRC3Q7RTR2 1065 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZNF296Q8WUU4 475 aaPredicted RBP4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 FCRL2Q96LA5 508 aaPredicted RBP4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 PRDM14Q9GZV8 571 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 ZCCHC4Q9H5U6 513 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 CRTAC1Q9NQ79 661 aa4.35□□□□□ -1.71
RNU4-42P-201ENST00000364738 HRKO00198 91 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 PI3P19957 117 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 HOXA5P20719 270 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 SDHBP21912 280 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 MCM4P33991 863 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 RTP1P59025 263 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 ATG4CQ96DT6 458 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 SIGLEC10Q96LC7 697 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms