RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 PABPN1LA6NDY0 278 aaKnown RBP12.71□□□□□ -0.38
COL4A5-202ENST00000361603 LMAN1P49257 510 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 ASIC2Q16515 512 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 MSL1Q68DK7 614 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 TNFAIP3P21580 790 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 BIRC3Q13489 604 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 TTLL6Q8N841 843 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.38
COL4A5-202ENST00000361603 FANCCQ00597 558 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 SLC9C1Q4G0N8 1177 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 DCAF17Q5H9S7 520 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 STAMBPO95630 424 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 METTL14Q9HCE5 456 aaKnown RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 CHMP2AO43633 222 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 JAK2O60674 1132 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 OSBPP22059 807 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 ORC2Q13416 577 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-202ENST00000361603 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 APOA5Q6Q788 366 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 PODNQ7Z5L7 613 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
COL4A5-202ENST00000361603 PRPF3O43395 683 aaKnown RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 CUL4AQ13619 759 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 IFNAR1P17181 557 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ARHGAP6O43182 974 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 SEPT2Q15019 361 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 USH1GQ495M9 461 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ARFGAP3Q9NP61 516 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 NRBP2Q9NSY0 501 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 SH2B2O14492 632 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 DNA2P51530 1060 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ZNF75DP51815 510 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ZHX1Q9UKY1 873 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ALX1Q15699 326 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 GPR162Q16538 588 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
COL4A5-202ENST00000361603 M0R2C6 588 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 NELFBQ8WX92 580 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
COL4A5-202ENST00000361603 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 CCDC14Q49A88 953 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-202ENST00000361603 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-202ENST00000361603 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 FLOT1O75955 427 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 CYP21A2P08686 494 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 GAP43P17677 238 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
COL4A5-202ENST00000361603 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
COL4A5-202ENST00000361603 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms