RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SDSP20132 328 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 NOS3P29474 1203 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 ZNF445P59923 1031 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 SF1Q15637 639 aaKnown RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 FNDC3BQ53EP0 1204 aaKnown RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 RNF180Q86T96 592 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 TRIM59Q8IWR1 403 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 SCUBE1Q8IWY4 988 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 ARHGEF39Q8N4T4 335 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 BVESQ8NE79 360 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 LENG1Q96BZ8 264 aaPredicted RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 CDC6Q99741 560 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 LRP2BPQ9P2M1 347 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 CGGBP1Q9UFW8 167 aaPredicted RBP6.97□□□□□ -1.29
RPL39-201ENST00000361575 GSG1L2A8MUP6 293 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 LRRN2O75325 713 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 COL8A1P27658 744 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 CYP4F3Q08477 520 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 NBPF9Q3BBW0 867 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 TAF7LQ5H9L4 462 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
RPL39-201ENST00000361575 ADAT2Q7Z6V5 191 aaKnown RBP6.96□□□□□ -1.3
RPL39-201ENST00000361575 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 IER2Q9BTL4 223 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 GBP3Q9H0R5 595 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 C1GALT1Q9NS00 363 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 CNTNAP5Q8WYK1 1306 aa6.96□□□□□ -1.3
RPL39-201ENST00000361575 MARCH6O60337 910 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 DLX3O60479 287 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 PDE8AO60658 829 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 PPM1BO75688 479 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 EOMESO95936 686 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 GLB1P16278 677 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 RNF4P78317 190 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 CDK5R2Q13319 367 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 TRIM61Q5EBN2 209 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 NSMFQ6X4W1 530 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 SLC7A14Q8TBB6 771 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 BRF1Q92994 677 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 ASPNQ9BXN1 380 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 MRPL4Q9BYD3 311 aaKnown RBP6.95□□□□□ -1.3
RPL39-201ENST00000361575 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 TRIM39Q9HCM9 518 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 AKT3Q9Y243 479 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 SUGT1Q9Y2Z0 365 aa6.95□□□□□ -1.3
RPL39-201ENST00000361575 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
RPL39-201ENST00000361575 SPATA31C1P0DKV0 1188 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 ITGA4P13612 1032 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
RPL39-201ENST00000361575 USP11P51784 963 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 EVA1CP58658 441 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
RPL39-201ENST00000361575 NTRK3Q16288 839 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 GPAT2Q6NUI2 795 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 UBR7Q8N806 425 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
RPL39-201ENST00000361575 WFDC12Q8WWY7 111 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 C1orf159Q96HA4 380 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 TARS2Q9BW92 718 aaKnown RBP6.94□□□□□ -1.3
RPL39-201ENST00000361575 CEP41Q9BYV8 373 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 USP21Q9UK80 565 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
RPL39-201ENST00000361575 A0A087WZG4 1122 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 BLACEA4D250 179 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 GAS2O43903 313 aaKnown RBP6.93□□□□□ -1.3
RPL39-201ENST00000361575 LEFTY1O75610 366 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 KCNH1O95259 989 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 ETV3P41162 512 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 GFRA1P56159 465 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 GTF2IRD2BQ6EKJ0 949 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 TMC3Q7Z5M5 1100 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 GTF2IRD2Q86UP8 949 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
RPL39-201ENST00000361575 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 GSTCDQ8NEC7 633 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 SYTL5Q8TDW5 730 aaPredicted RBP6.93□□□□□ -1.3
RPL39-201ENST00000361575 CHAC2Q8WUX2 184 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 MYRFLQ96LU7 910 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 Q96M66 194 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 NOL6Q9H6R4 1146 aaKnown RBP6.93□□□□□ -1.3
RPL39-201ENST00000361575 SLC52A2Q9HAB3 445 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 NOP53Q9NZM5 478 aaKnown RBP6.93□□□□□ -1.3
RPL39-201ENST00000361575 MINPP1Q9UNW1 487 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 ATP8A1Q9Y2Q0 1164 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
RPL39-201ENST00000361575 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms