RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 CETN3O15182 167 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 CCDC63Q8NA47 563 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
SMC5-201ENST00000361138 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 SAMSN1Q9NSI8 373 aaKnown RBP15.45■□□□□ 0.06
SMC5-201ENST00000361138 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 KRIT1O00522 736 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 COBLO75128 1261 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 CCDC38Q502W7 563 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 MGARPQ8TDB4 240 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
SMC5-201ENST00000361138 LUC7L3O95232 432 aaKnown RBP15.44■□□□□ 0.06
SMC5-201ENST00000361138 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 TMOD2Q9NZR1 351 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 M0R2C6 588 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 TSNARE1Q96NA8 513 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMC5-201ENST00000361138 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMC5-201ENST00000361138 SH3TC1Q8TE82 1336 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 PLCB3Q01970 1234 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 TRMT1LQ7Z2T5 733 aaKnown RBP15.44■□□□□ 0.06
SMC5-201ENST00000361138 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.44■□□□□ 0.06
SMC5-201ENST00000361138 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
SMC5-201ENST00000361138 KRT25Q7Z3Z0 450 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
SMC5-201ENST00000361138 DBNLQ9UJU6 430 aaKnown RBP15.43■□□□□ 0.06
SMC5-201ENST00000361138 FMNL1O95466 1100 aaPredicted RBP15.43■□□□□ 0.06
SMC5-201ENST00000361138 GNA14O95837 355 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 NNTQ13423 1086 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 MCUR1Q96AQ8 359 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 KRT12Q99456 494 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
SMC5-201ENST00000361138 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 ZBTB22O15209 634 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 GCP02774 474 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 CLTAP09496 248 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 ODF2LQ9ULJ1 636 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMC5-201ENST00000361138 TRIM68Q6AZZ1 485 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 DENND2AQ9ULE3 1009 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 B4DLN1 442 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 GRAMD1CQ8IYS0 662 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 AMFRQ9UKV5 643 aa15.43■□□□□ 0.06
SMC5-201ENST00000361138 RPSAP08865 295 aaKnown RBP15.42■□□□□ 0.06
SMC5-201ENST00000361138 ACTR5Q9H9F9 607 aaPredicted RBP15.42■□□□□ 0.06
SMC5-201ENST00000361138 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
SMC5-201ENST00000361138 PPARAQ07869 468 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 MRFAP1Q9Y605 127 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 MADDQ8WXG6 1647 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 PRDM1O75626 825 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 MUM1Q2TAK8 710 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 AP1ARQ63HQ0 302 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 CCDC105Q8IYK2 499 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 ANKRD42Q8N9B4 389 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 CCDC197Q8NCU1 140 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 SNX29Q8TEQ0 813 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 TMEM232C9JQI7 657 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 RASSF2P50749 326 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 SMYD4Q8IYR2 804 aaPredicted RBP15.42■□□□□ 0.06
SMC5-201ENST00000361138 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
SMC5-201ENST00000361138 ASIC3Q9UHC3 531 aa15.42■□□□□ 0.06
SMC5-201ENST00000361138 MFAP3LO75121 409 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 LPIN2Q92539 896 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 TBC1D7Q9P0N9 293 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 KLHL14Q9P2G3 628 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 SPDYE3A6NKU9 549 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 EXOC5O00471 708 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 N4BP2L2Q92802 583 aaPredicted RBP15.41■□□□□ 0.06
SMC5-201ENST00000361138 COPRSQ9NQ92 184 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 CTTNBP2NLQ9P2B4 639 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 FERP16591 822 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 CALCRLQ16602 461 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 CCDC62Q6P9F0 684 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 DNAI2Q9GZS0 605 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 RWDD2AQ9UIY3 292 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 TOM1O60784 492 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 HIP1RO75146 1068 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 STX2P32856 288 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 RASSF7Q02833 373 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 HHATQ5VTY9 493 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 RESP18Q5W5W9 173 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
SMC5-201ENST00000361138 FMR1NBQ8N0W7 255 aaPredicted RBP15.41■□□□□ 0.06
SMC5-201ENST00000361138 NIP7Q9Y221 180 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMC5-201ENST00000361138 YEATS2Q9ULM3 1422 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms