RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 E2F4Q16254 413 aa27.18■■□□□ 1.94
DDX42-201ENST00000359353 FOXR1Q6PIV2 292 aa27.18■■□□□ 1.94
DDX42-201ENST00000359353 FERMT2Q96AC1 680 aa27.18■■□□□ 1.94
DDX42-201ENST00000359353 TTF2Q9UNY4 1162 aaKnown RBP27.18■■□□□ 1.94
DDX42-201ENST00000359353 REXO2Q9Y3B8 237 aaKnown RBP27.18■■□□□ 1.94
DDX42-201ENST00000359353 RTL9Q8NET4 1388 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 PRPF3O43395 683 aaKnown RBP27.17■■□□□ 1.94
DDX42-201ENST00000359353 MSANTD4Q8NCY6 345 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 AK7Q96M32 723 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 MTMR7Q9Y216 660 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 PP2D1A8MPX8 630 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 ZMYND10O75800 440 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 TNFRSF25Q93038 417 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 CAPZA3Q96KX2 299 aa27.17■■□□□ 1.94
DDX42-201ENST00000359353 PRCPP42785 496 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 PMS1P54277 932 aaKnown RBP27.16■■□□□ 1.94
DDX42-201ENST00000359353 NLRP5P59047 1200 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 TCP11X2Q5H9J9 407 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 PDXDC2PQ6P474 469 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 TMTC1Q8IUR5 882 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 RAB21Q9UL25 225 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 BCORQ6W2J9 1755 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 IGHMBP2P38935 993 aaKnown RBP27.16■■□□□ 1.94
DDX42-201ENST00000359353 ATP2C1P98194 919 aaPredicted RBP27.16■■□□□ 1.94
DDX42-201ENST00000359353 CASP8Q14790 479 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 GPIHBP1Q8IV16 184 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 IQUBQ8NA54 791 aa27.16■■□□□ 1.94
DDX42-201ENST00000359353 FEZ2Q9UHY8 353 aaPredicted RBP27.16■■□□□ 1.94
DDX42-201ENST00000359353 LRRIQ3A6PVS8 624 aaPredicted RBP27.15■■□□□ 1.94
DDX42-201ENST00000359353 C10orf67Q8IYJ2 551 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 BRMS1Q9HCU9 246 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 COL4A1P02462 1669 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 ITGB4P16144 1822 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 TTC26A0AVF1 554 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 CYP26C1Q6V0L0 522 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 EXOC4Q96A65 974 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 TRIM34Q9BYJ4 488 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 PLEKHA4Q9H4M7 779 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 JAG2Q9Y219 1238 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 ANKRD36CQ5JPF3 1778 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 MYH13Q9UKX3 1938 aa27.15■■□□□ 1.94
DDX42-201ENST00000359353 USP17L12C9JPN9 530 aa27.14■■□□□ 1.94
DDX42-201ENST00000359353 USP17L21D6R901 530 aa27.14■■□□□ 1.94
DDX42-201ENST00000359353 LIMA1Q9UHB6 759 aaKnown RBP27.14■■□□□ 1.94
DDX42-201ENST00000359353 MYO6Q9UM54 1294 aa27.14■■□□□ 1.94
DDX42-201ENST00000359353 SKIDA1Q1XH10 827 aa27.14■■□□□ 1.94
DDX42-201ENST00000359353 GPKOWQ92917 476 aaPredicted RBP eCLIP27.14■■□□□ 1.942e-6■■■□□ 18.7
DDX42-201ENST00000359353 BTG4Q9NY30 223 aa27.14■■□□□ 1.94
DDX42-201ENST00000359353 CNTNAP5Q8WYK1 1306 aa27.14■■□□□ 1.93
DDX42-201ENST00000359353 ERLIN1O75477 346 aa27.14■■□□□ 1.93
DDX42-201ENST00000359353 TMTC3Q6ZXV5 915 aa27.14■■□□□ 1.93
DDX42-201ENST00000359353 IQCA1Q86XH1 822 aa27.14■■□□□ 1.93
DDX42-201ENST00000359353 RIOK1Q9BRS2 568 aaKnown RBP27.14■■□□□ 1.93
DDX42-201ENST00000359353 TAF1P21675 1872 aa27.13■■□□□ 1.93
DDX42-201ENST00000359353 GSPT2Q8IYD1 628 aaKnown RBP27.13■■□□□ 1.93
DDX42-201ENST00000359353 RPN1P04843 607 aaKnown RBP27.13■■□□□ 1.93
DDX42-201ENST00000359353 CYP2D6P10635 497 aa27.13■■□□□ 1.93
DDX42-201ENST00000359353 USP5P45974 858 aa27.13■■□□□ 1.93
DDX42-201ENST00000359353 RASSF8Q8NHQ8 419 aa27.13■■□□□ 1.93
DDX42-201ENST00000359353 ZNF384Q8TF68 577 aa27.13■■□□□ 1.93
DDX42-201ENST00000359353 HNRNPLLQ8WVV9 542 aaKnown RBP27.13■■□□□ 1.93
DDX42-201ENST00000359353 EPN1Q9Y6I3 576 aaPredicted RBP27.13■■□□□ 1.93
DDX42-201ENST00000359353 IRF2BP1Q8IU81 584 aa27.12■■□□□ 1.93
DDX42-201ENST00000359353 RWDD2AQ9UIY3 292 aa27.12■■□□□ 1.93
DDX42-201ENST00000359353 ITIH6Q6UXX5 1313 aa27.12■■□□□ 1.93
DDX42-201ENST00000359353 ANKRD65E5RJM6 399 aa27.12■■□□□ 1.93
DDX42-201ENST00000359353 NDUFA10O95299 355 aa27.12■■□□□ 1.93
DDX42-201ENST00000359353 ATP1A1P05023 1023 aaKnown RBP27.12■■□□□ 1.93
DDX42-201ENST00000359353 KLK7P49862 253 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 AMPD2Q01433 879 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 MUM1L1Q5H9M0 696 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 SEMA3EO15041 775 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 CCDC51Q96ER9 411 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 DCCP43146 1447 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 FAM205AQ6ZU69 1335 aa27.11■■□□□ 1.93
DDX42-201ENST00000359353 GTPBP6O43824 516 aaPredicted RBP27.1■■□□□ 1.93
DDX42-201ENST00000359353 PARP1P09874 1014 aaKnown RBP27.1■■□□□ 1.93
DDX42-201ENST00000359353 CTR9Q6PD62 1173 aa27.1■■□□□ 1.93
DDX42-201ENST00000359353 RIN2Q8WYP3 895 aaPredicted RBP27.1■■□□□ 1.93
DDX42-201ENST00000359353 MMS19Q96T76 1030 aa27.1■■□□□ 1.93
DDX42-201ENST00000359353 COL1A1P02452 1464 aaPredicted RBP27.1■■□□□ 1.93
DDX42-201ENST00000359353 ARAP2Q8WZ64 1704 aa27.1■■□□□ 1.93
DDX42-201ENST00000359353 TNNT3P45378 269 aaPredicted RBP27.1■■□□□ 1.93
DDX42-201ENST00000359353 NIP7Q9Y221 180 aaKnown RBP eCLIP27.1■■□□□ 1.93
DDX42-201ENST00000359353 ACTN2P35609 894 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 STAT6P42226 847 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 CCDC152Q4G0S7 254 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 CTCFLQ8NI51 663 aaPredicted RBP27.09■■□□□ 1.93
DDX42-201ENST00000359353 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
DDX42-201ENST00000359353 ERVV-1B6SEH8 477 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 FECHP22830 423 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 IL6STP40189 918 aaPredicted RBP27.09■■□□□ 1.93
DDX42-201ENST00000359353 RCAN1P53805 252 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 WHAMMP3Q1A5X7 153 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 ZNF658Q5TYW1 1059 aaPredicted RBP27.09■■□□□ 1.93
DDX42-201ENST00000359353 ANKRD20A12PQ8NF67 263 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 C3orf67Q6ZVT6 689 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 GOLGA5Q8TBA6 731 aa27.09■■□□□ 1.93
DDX42-201ENST00000359353 LRRC10BA6NIK2 292 aa27.08■■□□□ 1.93
DDX42-201ENST00000359353 POTEB2H3BUK9 544 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms