RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CCDC70Q6NSX1 233 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 TUBE1Q9UJT0 475 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 TCP10Q12799 353 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 NFIXQ14938 502 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 GUCA1BQ9UMX6 200 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■■■ 26.8
SSU72-202ENST00000359060 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 TRPM3Q9HCF6 1732 aaPredicted RBP12.6□□□□□ -0.39
SSU72-202ENST00000359060 TUBB4AP04350 444 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
SSU72-202ENST00000359060 TECP42680 631 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 CABP7Q86V35 215 aa12.6□□□□□ -0.39
SSU72-202ENST00000359060 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
SSU72-202ENST00000359060 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
SSU72-202ENST00000359060 MYO1BO43795 1136 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 TROAPQ12815 778 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 REXO1Q8N1G1 1221 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 ERICH4A6NGS2 130 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 RPN1P04843 607 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 RCAN1P53805 252 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 NCBP1Q09161 790 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 MORC3Q14149 939 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 SPA17Q15506 151 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 KRT79Q5XKE5 535 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 SRRTQ9BXP5 876 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 HPSEQ9Y251 543 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 DNA2P51530 1060 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 KRT25Q7Z3Z0 450 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 TBC1D8BQ0IIM8 1120 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
SSU72-202ENST00000359060 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 MMRN2Q9H8L6 949 aa12.59□□□□□ -0.39
SSU72-202ENST00000359060 CASP14P31944 242 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 SEC23AQ15436 765 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 CCDC40Q4G0X9 1142 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TDRD12Q587J7 1177 aaKnown RBP12.58□□□□□ -0.4
SSU72-202ENST00000359060 E4F1Q66K89 784 aaPredicted RBP12.58□□□□□ -0.4
SSU72-202ENST00000359060 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
SSU72-202ENST00000359060 DGKHQ86XP1 1220 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
SSU72-202ENST00000359060 TRAPPC10P48553 1259 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 EVX2Q03828 476 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 CUL4BQ13620 913 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TSG101Q99816 390 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 LRWD1Q9UFC0 647 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 GDAQ9Y2T3 454 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 PP2D1A8MPX8 630 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TEX33O43247 280 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 ORC4O43929 436 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
SSU72-202ENST00000359060 STX10O60499 249 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 TRIM37O94972 964 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 LONP1P36776 959 aaKnown RBP12.57□□□□□ -0.4
SSU72-202ENST00000359060 CDK8P49336 464 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 RBL2Q08999 1139 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 FAM114A1Q8IWE2 563 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 CD209Q9NNX6 404 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 CTAGE9A4FU28 777 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 NCAPHQ15003 741 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
SSU72-202ENST00000359060 SV2BQ7L1I2 683 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 PIGSQ96S52 555 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 ERLIN1O75477 346 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 C12orf60Q5U649 245 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 NBPF11Q86T75 865 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 FEZ1Q99689 392 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
SSU72-202ENST00000359060 SOWAHDA6NJG2 315 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 OR52Z1P0C646 297 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 COA7Q96BR5 231 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 CCDC43Q96MW1 224 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms