RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 DDAH1O94760 285 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 RAD51AP2Q09MP3 1159 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
COL20A1-201ENST00000358894 ENOX1Q8TC92 643 aaKnown RBP13.73□□□□□ -0.21
COL20A1-201ENST00000358894 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 GGA1Q9UJY5 639 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 TACC1O75410 805 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 MCM3P25205 808 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 MECOMQ03112 1051 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 CELF1Q92879 486 aaKnown RBP13.73□□□□□ -0.21
COL20A1-201ENST00000358894 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 PSMB7Q99436 277 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 ATP8A2Q9NTI2 1148 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 CPDO75976 1380 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 TRAF5O00463 557 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
COL20A1-201ENST00000358894 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
COL20A1-201ENST00000358894 SHTN1A0MZ66 631 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 SOWAHDA6NJG2 315 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 ERCC5P28715 1186 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 TECP42680 631 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 RBL2Q08999 1139 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 HLTFQ14527 1009 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 OSBPL5Q9H0X9 879 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 RPN1P04843 607 aaKnown RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 CKAP4Q07065 602 aaKnown RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 REXO1Q8N1G1 1221 aaKnown RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 CUL5Q93034 780 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 OVOS2A0A0G2JMS6 1433 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 SNX29Q8TEQ0 813 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 TBC1D7Q9P0N9 293 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 KCNQ2O43526 872 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 TRIM14Q14142 442 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 ALX1Q15699 326 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 ODF2Q5BJF6 829 aa13.72□□□□□ -0.21
COL20A1-201ENST00000358894 FAM207AQ9NSI2 230 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-201ENST00000358894 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
COL20A1-201ENST00000358894 CCZ1BP86790 482 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 CCZ1P86791 482 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-201ENST00000358894 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 PAGE5Q96GU1 130 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-201ENST00000358894 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.21
COL20A1-201ENST00000358894 IVLP07476 585 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
COL20A1-201ENST00000358894 GTF2IP78347 998 aa13.71□□□□□ -0.22
COL20A1-201ENST00000358894 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.22
COL20A1-201ENST00000358894 VPS36Q86VN1 386 aa13.71□□□□□ -0.22
COL20A1-201ENST00000358894 CPVLQ9H3G5 476 aa13.71□□□□□ -0.22
COL20A1-201ENST00000358894 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.22
COL20A1-201ENST00000358894 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 COL15A1P39059 1388 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 ATP2C2O75185 946 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 LRRC47Q8N1G4 583 aaKnown RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 NAA15Q9BXJ9 866 aaKnown RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 ABCC12Q96J65 1359 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 COPB1P53618 953 aaKnown RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 GRIN1Q05586 938 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 DNAJC21Q5F1R6 531 aaKnown RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 AEBP2Q6ZN18 517 aaPredicted RBP13.7□□□□□ -0.22
COL20A1-201ENST00000358894 STK36Q9NRP7 1315 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 BTDP43251 543 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 CALCRLQ16602 461 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 CCDC91Q7Z6B0 441 aa13.7□□□□□ -0.22
COL20A1-201ENST00000358894 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 E4F1Q66K89 784 aaPredicted RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 ACRBPQ8NEB7 543 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 TCHHQ07283 1943 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 ZSCAN26Q16670 478 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 RBM43Q6ZSC3 357 aaKnown RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 TMTC3Q6ZXV5 915 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 MYCBPQ99417 103 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms