RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 DZIP1Q86YF9 867 aaKnown RBP9.73□□□□□ -0.85
RFX3-202ENST00000358730 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 SPATA31A5Q5VU36 1347 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 SPATA31A7Q8IWB4 1347 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 ADAMTS3O15072 1205 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 GYPCP04921 128 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 CASP14P31944 242 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 IL17AQ16552 155 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 CNGA4Q8IV77 575 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
RFX3-202ENST00000358730 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 EPC1Q9H2F5 836 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 KAT14Q9H8E8 782 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 CALML3P27482 149 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 TXLNAP40222 546 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 PAK1Q13153 545 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 KRT31Q15323 416 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 TERF2Q15554 542 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 NBPF5PQ86XG9 351 aaPredicted RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 NLRP3Q96P20 1036 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 MTRQ99707 1265 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 ADGRG1Q9Y653 693 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 FAM205AQ6ZU69 1335 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 N4BP3O15049 544 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
RFX3-202ENST00000358730 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 FXR1P51114 621 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFX3-202ENST00000358730 SBK1Q52WX2 424 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 CREBRFQ8IUR6 639 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 BLIDQ8IZY5 108 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 RWDD2AQ9UIY3 292 aa9.72□□□□□ -0.85
RFX3-202ENST00000358730 ITIH6Q6UXX5 1313 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 A0A0U1RQJ8 604 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.85
RFX3-202ENST00000358730 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.85
RFX3-202ENST00000358730 KIF5CO60282 957 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 ZRANB2O95218 330 aaKnown RBP eCLIP9.71□□□□□ -0.85
RFX3-202ENST00000358730 CDC25AP30304 524 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 STAT6P42226 847 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 SLC10A5Q5PT55 438 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 ANKRD20A12PQ8NF67 263 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 RASGRP4Q8TDF6 673 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 NELFBQ8WX92 580 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 ATRIPQ8WXE1 791 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 NYXQ9GZU5 481 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 VPS16Q9H269 839 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 RMND1Q9NWS8 449 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 TAB2Q9NYJ8 693 aa9.71□□□□□ -0.85
RFX3-202ENST00000358730 SRP68Q9UHB9 627 aaKnown RBP9.71□□□□□ -0.85
RFX3-202ENST00000358730 ZNF831Q5JPB2 1677 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 RPN1P04843 607 aaKnown RBP9.71□□□□□ -0.86
RFX3-202ENST00000358730 LONP1P36776 959 aaKnown RBP9.71□□□□□ -0.86
RFX3-202ENST00000358730 TFAP4Q01664 338 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 SPAG1Q07617 926 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 ZNF658Q5TYW1 1059 aaPredicted RBP9.71□□□□□ -0.86
RFX3-202ENST00000358730 ARL6IP4Q66PJ3 421 aaKnown RBP9.71□□□□□ -0.86
RFX3-202ENST00000358730 GPR161Q8N6U8 529 aaKnown RBP9.71□□□□□ -0.86
RFX3-202ENST00000358730 PNMA1Q8ND90 353 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 RASSF8Q8NHQ8 419 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 GOLGA1Q92805 767 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 CCDC51Q96ER9 411 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 MAPK8IP1Q9UQF2 711 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 COL24A1Q17RW2 1714 aa9.71□□□□□ -0.86
RFX3-202ENST00000358730 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 USP5P45974 858 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 COPB1P53618 953 aaKnown RBP9.7□□□□□ -0.86
RFX3-202ENST00000358730 BARGINQ6ZT62 677 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 STAG2Q8N3U4 1231 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 LIMA1Q9UHB6 759 aaKnown RBP9.7□□□□□ -0.86
RFX3-202ENST00000358730 PCDHA4Q9UN74 947 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 GDAQ9Y2T3 454 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 KCNJ18B7U540 433 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 KCNJ12Q14500 433 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 TCP11X2Q5H9J9 407 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 RSRC2Q7L4I2 434 aaKnown RBP9.7□□□□□ -0.86
RFX3-202ENST00000358730 RASGRP2Q7LDG7 609 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 ACRBPQ8NEB7 543 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 DYNLL2Q96FJ2 89 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 NUP88Q99567 741 aaPredicted RBP9.7□□□□□ -0.86
RFX3-202ENST00000358730 ZSWIM4Q9H7M6 989 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 DISC1Q9NRI5 854 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 ABHD10Q9NUJ1 306 aa9.7□□□□□ -0.86
RFX3-202ENST00000358730 PLA2G4AP47712 749 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
RFX3-202ENST00000358730 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 RABGGTAQ92696 567 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 IL17RBQ9NRM6 502 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 NAV1Q8NEY1 1877 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 PRCPP42785 496 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms