RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 VPS37BQ9H9H4 285 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 H7C1D1 291 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ZPR1O75312 459 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 DIS3L2Q8IYB7 885 aaKnown RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 CCT6BQ92526 530 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ADCY9O60503 1353 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 CUL1Q13616 776 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 SPATA1Q5VX52 437 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 CAPRIN2Q6IMN6 1127 aaKnown RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 TTC6Q86TZ1 520 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 XAGE3Q8WTP9 111 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 RNF14Q9UBS8 474 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 EIF3BP55884 814 aaKnown RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ZC3H18Q86VM9 953 aaKnown RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 HAUS1Q96CS2 278 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 SCINQ9Y6U3 715 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 FLT4P35916 1363 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 MYH7P12883 1935 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 NOSTRINQ8IVI9 506 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ANXA1P04083 346 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 HIBCHQ6NVY1 386 aaPredicted RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 CC2D1AQ6P1N0 951 aaPredicted RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 PIK3AP1Q6ZUJ8 805 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ZNF274Q96GC6 653 aaPredicted RBP9.63□□□□□ -0.87
COL6A6-201ENST00000358511 PDLIM2Q96JY6 352 aa9.63□□□□□ -0.87
COL6A6-201ENST00000358511 ARHGAP4P98171 946 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 KRT40Q6A162 431 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 PHKBQ93100 1093 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 DTNBP1Q96EV8 351 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 ARHGEF18Q6ZSZ5 1173 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 FAM133BQ5BKY9 247 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 SRLQ86TD4 932 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 TRIM37O94972 964 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 CNGA1P29973 690 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 CASP14P31944 242 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 PDCD2Q16342 344 aaPredicted RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 NME8Q8N427 588 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 KIFC2Q96AC6 838 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 USP28Q96RU2 1077 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 TUBB6Q9BUF5 446 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 NPATQ14207 1427 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 XRCC5P13010 732 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 MAN1A1P33908 653 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 RETREG2Q8NC44 543 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 CARMIL3Q8ND23 1372 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 LETM2Q2VYF4 491 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 LMBR1LQ6UX01 489 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 C11orf57Q6ZUT1 292 aaPredicted RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 DPCR1Q3MIW9 517 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 BZW2Q9Y6E2 419 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 MYH9P35579 1960 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 MYH15Q9Y2K3 1946 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 ZMYND10O75800 440 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 HEXIM1O94992 359 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 GPTP24298 496 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 PFDN4Q9NQP4 134 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 GEMIN8Q9NWZ8 242 aaKnown RBP9.62□□□□□ -0.87
COL6A6-201ENST00000358511 KIAA0556O60303 1618 aa9.62□□□□□ -0.87
COL6A6-201ENST00000358511 CCDC92Q53HC0 331 aaPredicted RBP9.61□□□□□ -0.87
COL6A6-201ENST00000358511 TRMT1LQ7Z2T5 733 aaKnown RBP9.61□□□□□ -0.87
COL6A6-201ENST00000358511 VSTM4Q8IW00 320 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 ABCB6Q9NP58 842 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 RTEL1Q9NZ71 1219 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 IFNAR2P48551 515 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 STRN3Q13033 797 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 EPB41L5Q9HCM4 733 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 TPCN1Q9ULQ1 816 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 A2MP01023 1474 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 ENC1O14682 589 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 BUB1O43683 1085 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 PFKFB2O60825 505 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 ADCY8P40145 1251 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 DRP2Q13474 957 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 BIRC3Q13489 604 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 GOLGA8QA0A0J9YX86 632 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 GOLGA8OA6NCC3 632 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 B4E1Z4 1266 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 GOLGA8NF8WBI6 632 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 GIPC1O14908 333 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 SATB1Q01826 763 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
COL6A6-201ENST00000358511 ANKRD20A8PQ5CZ79 823 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms