RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
TPM1-206ENST00000358278 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 BRPF3Q9ULD4 1205 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 ZBTB43O43298 467 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 CALM1P0DP23 149 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 CALM2P0DP24 149 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 CALM3P0DP25 149 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 RXRAP19793 462 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 VEGFBP49765 207 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 TROAPQ12815 778 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 FAM83BQ5T0W9 1011 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 TREML2Q5T2D2 321 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 RAB11FIP4Q86YS3 637 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 RPAP3Q9H6T3 665 aaPredicted RBP17.8■□□□□ 0.44
TPM1-206ENST00000358278 AGTPBP1Q9UPW5 1226 aa17.8■□□□□ 0.44
TPM1-206ENST00000358278 PARP1P09874 1014 aaKnown RBP17.79■□□□□ 0.44
TPM1-206ENST00000358278 BMP3P12645 472 aa17.79■□□□□ 0.44
TPM1-206ENST00000358278 KIF23Q02241 960 aaPredicted RBP17.79■□□□□ 0.44
TPM1-206ENST00000358278 KCTD1Q719H9 257 aa17.79■□□□□ 0.44
TPM1-206ENST00000358278 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
TPM1-206ENST00000358278 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
TPM1-206ENST00000358278 FRMPD2Q68DX3 1309 aaPredicted RBP17.79■□□□□ 0.44
TPM1-206ENST00000358278 SNHG28P0DPA3 235 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 INHBEP58166 350 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
TPM1-206ENST00000358278 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■□□□□ 11.2
TPM1-206ENST00000358278 MOGSQ13724 837 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 TESPA1A2RU30 521 aaPredicted RBP17.78■□□□□ 0.44
TPM1-206ENST00000358278 GOLGA8AA7E2F4 631 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 KIF5BP33176 963 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
TPM1-206ENST00000358278 ZNF543Q08ER8 600 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 GRM4Q14833 912 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 GPATCH4Q5T3I0 446 aaKnown RBP17.78■□□□□ 0.44
TPM1-206ENST00000358278 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
TPM1-206ENST00000358278 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
TPM1-206ENST00000358278 USP17L15C9J2P7 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L13C9JLJ4 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L11C9JVI0 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L18D6R9N7 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L22D6RA61 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L17D6RBQ6 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L19D6RCP7 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L20D6RJB6 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 STAT2P52630 851 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 RCAN1P53805 252 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 EVCP57679 992 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 IRX3P78415 501 aaPredicted RBP17.77■□□□□ 0.44
TPM1-206ENST00000358278 USP17L24Q0WX57 530 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 STK3Q13188 491 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 OTUD7BQ6GQQ9 843 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 REM2Q8IYK8 340 aaPredicted RBP17.77■□□□□ 0.44
TPM1-206ENST00000358278 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
TPM1-206ENST00000358278 MAP3K14Q99558 947 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 GPCPD1Q9NPB8 672 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
TPM1-206ENST00000358278 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 PDHXO00330 501 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 FLOT1O75955 427 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
TPM1-206ENST00000358278 MAP2K2P36507 400 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 RTN1Q16799 776 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 GPAT2Q6NUI2 795 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 FANCBQ8NB91 859 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 PTPN18Q99952 460 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 MAD2L2Q9UI95 211 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 PNMA3Q9UL41 463 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 A0A0G2JMZ2 1700 aa17.76■□□□□ 0.43
TPM1-206ENST00000358278 IGF2BP3O00425 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
TPM1-206ENST00000358278 OSBPP22059 807 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 HOXA7P31268 230 aaPredicted RBP17.75■□□□□ 0.43
TPM1-206ENST00000358278 MCM2P49736 904 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 CATSPERGQ6ZRH7 1159 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 IFNL1Q8IU54 200 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 SLKQ9H2G2 1235 aaPredicted RBP17.75■□□□□ 0.43
TPM1-206ENST00000358278 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
TPM1-206ENST00000358278 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
TPM1-206ENST00000358278 TM4SF4P48230 202 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 CCT2P78371 535 aaKnown RBP17.75■□□□□ 0.43
TPM1-206ENST00000358278 STAG2Q8N3U4 1231 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 CHURC1Q8WUH1 139 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
TPM1-206ENST00000358278 NID2Q14112 1375 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 CCDC196A0A1B0GTZ2 297 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 PALM3A6NDB9 673 aaPredicted RBP17.74■□□□□ 0.43
TPM1-206ENST00000358278 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
TPM1-206ENST00000358278 GNAQP50148 359 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 ME3Q16798 604 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms