RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 WDR78Q5VTH9 848 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 MKL1Q969V6 931 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 CEP95Q96GE4 821 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 MTMR4Q9NYA4 1195 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 CCDC171Q6TFL3 1326 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 RPTORQ8N122 1335 aa24.34■■□□□ 1.49
PPP1CA-202ENST00000358239 HIP1O00291 1037 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 STRNO43815 780 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 RAD21O60216 631 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 ZKSCAN1P17029 563 aaPredicted RBP24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 SDSP20132 328 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 PTPREP23469 700 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 GRB14Q14449 540 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 MOV10L1Q9BXT6 1211 aaKnown RBP24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 HMX1Q9NP08 348 aaPredicted RBP24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 ADAMTS5Q9UNA0 930 aa24.33■■□□□ 1.49
PPP1CA-202ENST00000358239 F5H6K3 240 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 KLRC3Q07444 240 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 FAM83BQ5T0W9 1011 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 ATG4CQ96DT6 458 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 MROH8Q9H579 483 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 CLIP2Q9UDT6 1046 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 PPP1R9AQ9ULJ8 1098 aa24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.32■■□□□ 1.48
PPP1CA-202ENST00000358239 HOXC6P09630 235 aa24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 HSPD1P10809 573 aaKnown RBP24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 IRX6P78412 446 aaPredicted RBP24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 TFAP4Q01664 338 aa24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 MAP3K21Q5TCX8 1036 aa24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 GMCL1P1Q8NEA9 526 aa24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
PPP1CA-202ENST00000358239 NDUFB10O96000 172 aa24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 FGAP02671 866 aa24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 PLS1Q14651 629 aa24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 ZNF589Q86UQ0 364 aaPredicted RBP24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 CRISPLD2Q9H0B8 497 aa24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 DIAPH3Q9NSV4 1193 aa24.3■■□□□ 1.48
PPP1CA-202ENST00000358239 TSPY2A6NKD2 308 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 ORC4O43929 436 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 SLC25A27O95847 323 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 FGRP09769 529 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 PRKAR2AP13861 404 aaKnown RBP24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 ERCC3P19447 782 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 CTDSPL2Q05D32 466 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 FAM47AQ5JRC9 791 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 ABRAQ8N0Z2 381 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 SLF1Q9BQI6 1058 aa24.29■■□□□ 1.48
PPP1CA-202ENST00000358239 VWA5AO00534 786 aa24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 TFRCP02786 760 aaKnown RBP24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 PCP11498 1178 aaKnown RBP24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 COPB2P35606 906 aa24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 UBE2Q1Q7Z7E8 422 aa24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 FBXO28Q9NVF7 368 aa24.28■■□□□ 1.48
PPP1CA-202ENST00000358239 ALPK3Q96L96 1907 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 FARP2O94887 1054 aaPredicted RBP24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 TRIM32Q13049 653 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 TMEM132BQ14DG7 1078 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 SAMD1Q6SPF0 538 aaPredicted RBP24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 NCAPG2Q86XI2 1143 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 ANKLE1Q8NAG6 615 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 PRPF38AQ8NAV1 312 aaKnown RBP24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 SLC5A4Q9NY91 659 aa24.27■■□□□ 1.48
PPP1CA-202ENST00000358239 RANBP6O60518 1105 aaKnown RBP24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 CCL14Q16627 93 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 MFSD14CQ5VZR4 134 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 CWC27Q6UX04 472 aaKnown RBP24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 DPP9Q86TI2 863 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 RIOX2Q8IUF8 465 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 LRRC47Q8N1G4 583 aaKnown RBP24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 NUP88Q99567 741 aaPredicted RBP24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 HTATIP2Q9BUP3 242 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 FEM1BQ9UK73 627 aa24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 ZNF214Q9UL59 606 aaPredicted RBP24.26■■□□□ 1.47
PPP1CA-202ENST00000358239 ADORA2AP29274 412 aa24.25■■□□□ 1.47
PPP1CA-202ENST00000358239 STAT3P40763 770 aa24.25■■□□□ 1.47
PPP1CA-202ENST00000358239 CACNB2Q08289 660 aaPredicted RBP24.25■■□□□ 1.47
PPP1CA-202ENST00000358239 STX8Q9UNK0 236 aa24.25■■□□□ 1.47
PPP1CA-202ENST00000358239 FCER1AP12319 257 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 PDE4AP27815 886 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 NT5C2P49902 561 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 TTC22Q5TAA0 569 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 SLFN13Q68D06 897 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 REPS2Q8NFH8 660 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 GMCL1Q96IK5 515 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 TEX13BQ9BXU2 312 aa24.24■■□□□ 1.47
PPP1CA-202ENST00000358239 BMP3P12645 472 aa24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 OLFML2BQ68BL8 750 aa24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 RNF41Q9H4P4 317 aaPredicted RBP24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 IL17RBQ9NRM6 502 aa24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 TOMM22Q9NS69 142 aa24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 SMCHD1A6NHR9 2005 aa24.23■■□□□ 1.47
PPP1CA-202ENST00000358239 ATP2A1O14983 1001 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 FDX1P10109 184 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 NOVP48745 357 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 MFSD6Q6ZSS7 791 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 NPLOC4Q8TAT6 608 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 FLRT1Q9NZU1 646 aa24.22■■□□□ 1.47
PPP1CA-202ENST00000358239 MCM3APO60318 1980 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms