RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 AOPEPQ8N6M6 819 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC97Q96F63 343 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 TAOK3Q9H2K8 898 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 TMEM165Q9HC07 324 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 PUF60Q9UHX1 559 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 TPCN1Q9ULQ1 816 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 PAPPA2Q9BXP8 1791 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZSCAN9O15535 394 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 NTSR2O95665 410 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 CHMP4BP1P59074 171 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 GOLGA8FQ08AF8 430 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 GOLGA8DPQ0D2H9 430 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 PRPF40BQ6NWY9 871 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 ATP6V0A4Q9HBG4 840 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 SLC39A2Q9NP94 309 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 WDHD1O75717 1129 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 TFRCP02786 760 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 OATP04181 439 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 RASSF7Q02833 373 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 PTPN12Q05209 780 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 ACCSLQ4AC99 568 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 MMTAG2Q9BU76 263 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 SNRKQ9NRH2 765 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 CREBZFQ9NS37 354 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 NIP7Q9Y221 180 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCAL1-202ENST00000358207 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCP110O43303 1012 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 AARSP49588 968 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 ST3GAL1Q11201 340 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CDC37L1Q7L3B6 337 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 LDHDQ86WU2 507 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 MYLK4Q86YV6 388 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC83Q8IWF9 413 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 SLC40A1Q9NP59 571 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CNTNAP1P78357 1384 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 MEFVO15553 781 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CUTAO60888 179 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 FOXO4P98177 505 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC40Q4G0X9 1142 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 SRGAP1Q7Z6B7 1085 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 LEO1Q8WVC0 666 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 PLEKHG4BQ96PX9 1271 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 EPAS1Q99814 870 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 YIPF2Q9BWQ6 316 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 TSGA10Q9BZW7 698 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 GREM2Q9H772 168 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 PGAP2Q9UHJ9 254 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 SPDYE3A6NKU9 549 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 ERLIN1O75477 346 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 RHOXF2BP0C7M4 288 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 NEFHP12036 1026 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 IMPDH2P12268 514 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CPA1P15085 419 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 RANBP1P43487 201 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 TRIM28Q13263 835 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 LAMB3Q13751 1172 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 STX1AQ16623 288 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 RINLQ6ZS11 566 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 TSHZ1Q6ZSZ6 1077 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 RHOXF2Q9BQY4 288 aa10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCAL1-202ENST00000358207 RTL9Q8NET4 1388 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 WTIPA6NIX2 430 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CDKL5O76039 1030 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CDC25CP30307 473 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 SPATA21Q7Z572 469 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 NLRP10Q86W26 655 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 TMTC2Q8N394 836 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 B4GALNT2Q8NHY0 566 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 HOMER3Q9NSC5 361 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 PPP2R2CQ9Y2T4 447 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 RBBP6Q7Z6E9 1792 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 H7C1W4 665 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 EIF3HO15372 352 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CD151P48509 253 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CASP7P55210 303 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC57Q2TAC2 916 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 MIS18BP1Q6P0N0 1132 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 HHIPL1Q96JK4 782 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZNF396Q96N95 335 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 VCPKMTQ9H867 229 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms