RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CCDC85BQ15834 202 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 GNPTABQ3T906 1256 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 TAGAPQ8N103 731 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 AOPEPQ8N6M6 819 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 TGFBRAP1Q8WUH2 860 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 ZC4H2Q9NQZ6 224 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 HESX1Q9UBX0 185 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CNPY2Q9Y2B0 182 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 A6NJR5 290 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 ASMTLO95671 621 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 UBXN2AP68543 259 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 WASHC5Q12768 1159 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 RINLQ6ZS11 566 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 Q6ZUG5 572 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 PIK3AP1Q6ZUJ8 805 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CADPS2Q86UW7 1296 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 ANKRD42Q8N9B4 389 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 RPGRIP1Q96KN7 1286 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 NOC4LQ9BVI4 516 aaKnown RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CACNA2D2Q9NY47 1150 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 SEPT9Q9UHD8 586 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 ATP2B4P23634 1241 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 DBN1Q16643 649 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 COPS6Q7L5N1 327 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 NANOGNBQ7Z5D8 188 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CCNYQ8ND76 341 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CTAGE1Q96RT6 745 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.38□□□□□ -1.396e-6■■□□□ 12.9
BRCA1-203ENST00000357654 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 UTP11Q9Y3A2 253 aaKnown RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CTAGE9A4FU28 777 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 PI4KAP2A4QPH2 592 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 APOEP02649 317 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 NONOQ15233 471 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 CACNA2D3Q8IZS8 1091 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 UBL4BQ8N7F7 174 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 PI4KAP1Q8N8J0 262 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 PSMB7Q99436 277 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 CHPF2Q9P2E5 772 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 MAP3K13O43283 966 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 HIBADHP31937 336 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TNNC1P63316 161 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 GTF2IP78347 998 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 XKR9Q5GH70 373 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 RWDD4Q6NW29 188 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 SLC10A4Q96EP9 437 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 FBXL5Q9UKA1 691 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 ZBED9Q6R2W3 1325 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 H0YC42 278 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 H3BRJ5 948 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 ZSCAN9O15535 394 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TAF5LO75529 589 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 PIK3CAP42336 1068 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 NFX1Q12986 1120 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TRIM32Q13049 653 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 NKX1-1Q15270 411 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TTC19Q6DKK2 380 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 SARS2Q9NP81 518 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 SENP1Q9P0U3 644 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 FYCO1Q9BQS8 1478 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 CREB3O43889 395 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 IL2RBP14784 551 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 CAPRIN1Q14444 709 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 C11orf74Q86VG3 221 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 KIAA0825Q8IV33 1275 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 C2orf69Q8N8R5 385 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 AFG1LQ8WV93 481 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 DENND3A2RUS2 1198 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 SKAP2O75563 359 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TMEM191BP0C7N4 346 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 POLR2BP30876 1174 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 NBPF20Q3BBV1 942 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 NBPF10Q6P3W6 841 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 DSTYKQ6XUX3 929 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 RAET1EQ8TD07 263 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 FAM149B1Q96BN6 582 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 ARMT1Q9H993 441 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 SLC38A10Q9HBR0 1119 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 G3BP2Q9UN86 482 aaKnown RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TMEM247A6NEH6 219 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 LMNB1P20700 586 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 RXRBP28702 533 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 TTLL7Q6ZT98 887 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 B4GALNT2Q8NHY0 566 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 CEP19Q96LK0 163 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 DMAP1Q9NPF5 467 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-203ENST00000357654 MCM8Q9UJA3 840 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 STK38LQ9Y2H1 464 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 ORC6Q9Y5N6 252 aa6.37□□□□□ -1.39
BRCA1-203ENST00000357654 ATP5DP30049 168 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 CCNA1P78396 465 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 LGSNQ5TDP6 509 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 THEMIS2Q5TEJ8 643 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 FRA10AC1Q70Z53 315 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 KLHL7Q8IXQ5 586 aa6.36□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC105Q8IYK2 499 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms