RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 GIMAP6Q6P9H5 292 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 REPS2Q8NFH8 660 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 UBE2OQ9C0C9 1292 aaKnown RBP12.26□□□□□ -0.45
LINC01560-201ENST00000357412 EPB41L4AQ9HCS5 686 aaPredicted RBP12.26□□□□□ -0.45
LINC01560-201ENST00000357412 SLC5A4Q9NY91 659 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 GPAA1O43292 621 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 FCER1AP12319 257 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 STAT3P40763 770 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 FAM83BQ5T0W9 1011 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 GJC2Q5T442 439 aaPredicted RBP12.25□□□□□ -0.45
LINC01560-201ENST00000357412 ANO1Q5XXA6 986 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
LINC01560-201ENST00000357412 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
LINC01560-201ENST00000357412 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 MINDY4BA8MYZ0 360 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 F5H6K3 240 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 M0R2C6 588 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 PGK2P07205 417 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
LINC01560-201ENST00000357412 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
LINC01560-201ENST00000357412 KLRC3Q07444 240 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 ZNF792Q3KQV3 632 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 ARRDC4Q8NCT1 418 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 MMP19Q99542 508 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
LINC01560-201ENST00000357412 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 NYAP2Q9P242 653 aa12.24□□□□□ -0.45
LINC01560-201ENST00000357412 ROBO3Q96MS0 1386 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 RAD21O60216 631 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 NDUFB10O96000 172 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 GNAT2P19087 354 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 RTP1P59025 263 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 KCTD2Q14681 263 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
LINC01560-201ENST00000357412 SLF1Q9BQI6 1058 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
LINC01560-201ENST00000357412 DIS3Q9Y2L1 958 aaKnown RBP12.23□□□□□ -0.45
LINC01560-201ENST00000357412 DOCK3Q8IZD9 2030 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 PATL2C9JE40 543 aaKnown RBP12.22□□□□□ -0.45
LINC01560-201ENST00000357412 PRDM1O75626 825 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 COPB2P35606 906 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 SNX17Q15036 470 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 LRRC41Q15345 812 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 FAM47AQ5JRC9 791 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 MKL1Q969V6 931 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
LINC01560-201ENST00000357412 DDX60LQ5H9U9 1706 aaKnown RBP12.22□□□□□ -0.45
LINC01560-201ENST00000357412 PLXNB2O15031 1838 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 KBTBD13C9JR72 458 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 APPP05067 770 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 ZNF865P0CJ78 1059 aaPredicted RBP12.21□□□□□ -0.45
LINC01560-201ENST00000357412 TAL1P17542 331 aaPredicted RBP12.21□□□□□ -0.45
LINC01560-201ENST00000357412 TDO2P48775 406 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 Q7L0L9 218 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 ZNF444Q8N0Y2 327 aaPredicted RBP12.21□□□□□ -0.45
LINC01560-201ENST00000357412 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 CEP95Q96GE4 821 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.45
LINC01560-201ENST00000357412 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 ATP11BQ9Y2G3 1177 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 RIPK3Q9Y572 518 aa12.21□□□□□ -0.45
LINC01560-201ENST00000357412 MGAMO43451 1857 aa12.21□□□□□ -0.46
LINC01560-201ENST00000357412 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 ERC2O15083 957 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
LINC01560-201ENST00000357412 TRIM60Q495X7 471 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
LINC01560-201ENST00000357412 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
LINC01560-201ENST00000357412 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 FERMT2Q96AC1 680 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
LINC01560-201ENST00000357412 ZNF287Q9HBT7 754 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 XPNPEP3Q9NQH7 507 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
LINC01560-201ENST00000357412 DNAJC25-GNG10A0A024R161 153 aa12.19□□□□□ -0.46
LINC01560-201ENST00000357412 FOXP2O15409 715 aa12.19□□□□□ -0.46
LINC01560-201ENST00000357412 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
LINC01560-201ENST00000357412 TTLL1O95922 423 aa12.19□□□□□ -0.46
LINC01560-201ENST00000357412 PGK1P00558 417 aa12.19□□□□□ -0.46
LINC01560-201ENST00000357412 RARBP10826 455 aa12.19□□□□□ -0.46
LINC01560-201ENST00000357412 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
LINC01560-201ENST00000357412 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
LINC01560-201ENST00000357412 GMCL1P1Q8NEA9 526 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms