RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 FAN1Q9Y2M0 1017 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 SAR1BQ9Y6B6 198 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 WDR19Q8NEZ3 1342 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 PIK3C2AO00443 1686 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 FAM170AA1A519 330 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 CCDC151A5D8V7 595 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 TRIM49BA6NDI0 452 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 B4DLN1 442 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 PICALMQ13492 652 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 SPTY2D1Q68D10 685 aaPredicted RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 TYW1BQ6NUM6 668 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 REXO1L1PQ8IX06 675 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 STAG1Q8WVM7 1258 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 RASSF4Q9H2L5 321 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 ABCB6Q9NP58 842 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 BCCIPQ9P287 314 aaKnown RBP eCLIP7.66□□□□□ -1.18
RTN4-203ENST00000357376 MRFAP1Q9Y605 127 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 ADGRG1Q9Y653 693 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 BICDL2A1A5D9 508 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 TMCO5BA8MYB1 307 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 FGFR1OPO95684 399 aaKnown RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 ZSCAN29Q8IWY8 852 aaPredicted RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 ANKRD13CQ8N6S4 541 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
RTN4-203ENST00000357376 PNMA1Q8ND90 353 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 IFT81Q8WYA0 676 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 CCDC51Q96ER9 411 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 PANX2Q96RD6 677 aa7.66□□□□□ -1.18
RTN4-203ENST00000357376 LDHBP07195 334 aaKnown RBP7.65□□□□□ -1.18
RTN4-203ENST00000357376 PARP1P09874 1014 aaKnown RBP7.65□□□□□ -1.18
RTN4-203ENST00000357376 ST5P78524 1137 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 WHAMMP3Q1A5X7 153 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 MAATS1Q7Z4T9 603 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 TICAM2Q86XR7 235 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 C6orf50Q9HD87 102 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 C6orf229H3BNL8 230 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 CRKLP46109 303 aaKnown RBP7.65□□□□□ -1.18
RTN4-203ENST00000357376 MRPS25P82663 173 aaKnown RBP7.65□□□□□ -1.18
RTN4-203ENST00000357376 CYP27A1Q02318 531 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 RAD9BQ6WBX8 426 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 BRINP3Q76B58 766 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 CABP7Q86V35 215 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 C2CD5Q86YS7 1000 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 MAPKAPK5Q8IW41 473 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 SECISBP2LQ93073 1101 aaKnown RBP7.65□□□□□ -1.18
RTN4-203ENST00000357376 MAP3K14Q99558 947 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 HPSEQ9Y251 543 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 STK36Q9NRP7 1315 aa7.65□□□□□ -1.18
RTN4-203ENST00000357376 ANKRD65E5RJM6 399 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 ZEB2O60315 1214 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 SRGAP2O75044 1071 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 CSF1RP07333 972 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 IL6STP40189 918 aaPredicted RBP7.65□□□□□ -1.19
RTN4-203ENST00000357376 KCNJ6P48051 423 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 RAD51AP2Q09MP3 1159 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 ADAM21Q9UKJ8 722 aa7.65□□□□□ -1.19
RTN4-203ENST00000357376 FAM208AQ9UK61 1670 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 HSF2BPO75031 334 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 CYP2D6P10635 497 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 H2AFXP16104 143 aaPredicted RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 TECP42680 631 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TOB1P50616 345 aaPredicted RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 FXR1P51114 621 aaKnown RBP eCLIP7.64□□□□□ -1.199e-8■■■■□ 20
RTN4-203ENST00000357376 RBM5P52756 815 aaKnown RBP eCLIP7.64□□□□□ -1.19
RTN4-203ENST00000357376 TUBB4BP68371 445 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 SND1Q7KZF4 910 aaKnown RBP eCLIP7.64□□□□□ -1.193e-12■■■■□ 21.6
RTN4-203ENST00000357376 TGFBRAP1Q8WUH2 860 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 RRP36Q96EU6 259 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 SLC39A2Q9NP94 309 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 NLRC4Q9NPP4 1024 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TBC1D7Q9P0N9 293 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 FHOD1Q9Y613 1164 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 PP2D1A8MPX8 630 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 PLA2G4AP47712 749 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TUBB2AQ13885 445 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 RNF187Q5TA31 235 aaPredicted RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 FAM76AQ8TAV0 307 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TUBB2BQ9BVA1 445 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 ZNF446Q9NWS9 450 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 ABCC12Q96J65 1359 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 H7C1D1 291 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TRAF5O00463 557 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 PRPF3O43395 683 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 NDUFA10O95299 355 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TUBBP07437 444 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 LDHCP07864 332 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 PTPROQ16827 1216 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 KRT79Q5XKE5 535 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 SV2BQ7L1I2 683 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TRMT1LQ7Z2T5 733 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 MICALL1Q8N3F8 863 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 ZNF579Q8NAF0 562 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 SPAG5Q96R06 1193 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 TUBGCP2Q9BSJ2 902 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms