RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MUM1Q2TAK8 710 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 GBP5Q96PP8 586 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 PFDN4Q9NQP4 134 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 IRX4P78413 519 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 ATP2A3Q93084 1043 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 RILPQ96NA2 401 aa16.37■□□□□ 0.21
CHD4-201ENST00000357008 GIPC1O14908 333 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
CHD4-201ENST00000357008 MAP3K21Q5TCX8 1036 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 SH3BGRP55822 239 aaPredicted RBP16.36■□□□□ 0.21
CHD4-201ENST00000357008 PPARAQ07869 468 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 TFAP4Q01664 338 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 GRK7Q8WTQ7 553 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
CHD4-201ENST00000357008 UFL1O94874 794 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 MAST3O60307 1309 aa16.36■□□□□ 0.21
CHD4-201ENST00000357008 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 TAF5LO75529 589 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 BLIDQ8IZY5 108 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 GBP7Q8N8V2 638 aaPredicted RBP16.35■□□□□ 0.21
CHD4-201ENST00000357008 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 SH3BP5O60239 455 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
CHD4-201ENST00000357008 EAF2Q96CJ1 260 aaPredicted RBP16.35■□□□□ 0.21
CHD4-201ENST00000357008 MYCBPQ99417 103 aaPredicted RBP16.35■□□□□ 0.21
CHD4-201ENST00000357008 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 RIC8AQ9NPQ8 531 aa16.35■□□□□ 0.21
CHD4-201ENST00000357008 GCKP35557 465 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 BUB1O43683 1085 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
CHD4-201ENST00000357008 ABCB4P21439 1286 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 PHBP35232 272 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
CHD4-201ENST00000357008 MAP7Q14244 749 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 RNF34Q969K3 372 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 ARMCX3Q9UH62 379 aaPredicted RBP16.34■□□□□ 0.21
CHD4-201ENST00000357008 CASC4Q6P4E1 433 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 PAXIP1Q6ZW49 1069 aaPredicted RBP16.34■□□□□ 0.21
CHD4-201ENST00000357008 IWS1Q96ST2 819 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 CCDC13Q8IYE1 715 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 ARPP21Q9UBL0 812 aaPredicted RBP16.34■□□□□ 0.21
CHD4-201ENST00000357008 A1BGP04217 495 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 CD19P15391 556 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 NRBP1Q9UHY1 535 aa16.34■□□□□ 0.21
CHD4-201ENST00000357008 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.21
CHD4-201ENST00000357008 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.21
CHD4-201ENST00000357008 PALM2Q8IXS6 379 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 CCT5P48643 541 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 HAUS7Q99871 368 aa16.33■□□□□ 0.21
CHD4-201ENST00000357008 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.21
CHD4-201ENST00000357008 H2AFZP0C0S5 128 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 H2AFVQ71UI9 128 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 DPH5Q9H2P9 285 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 ARHGEF10O15013 1369 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 IKBKBO14920 756 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 RPN1P04843 607 aaKnown RBP16.33■□□□□ 0.2
CHD4-201ENST00000357008 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 ADCY8P40145 1251 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.2
CHD4-201ENST00000357008 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 CTAGE3PQ8IX95 158 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.2
CHD4-201ENST00000357008 KRT12Q99456 494 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 ADCY9O60503 1353 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 TEX14Q8IWB6 1497 aa16.33■□□□□ 0.2
CHD4-201ENST00000357008 SNCBQ16143 134 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 PTPRTO14522 1441 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 CLIC6Q96NY7 704 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 CCDC117Q8IWD4 279 aaPredicted RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 BIN2Q9UBW5 565 aaPredicted RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 PCDHA5Q9Y5H7 936 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 CFAP43Q8NDM7 1665 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 DDX39AO00148 427 aaKnown RBP16.32■□□□□ 0.2
CHD4-201ENST00000357008 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
CHD4-201ENST00000357008 MAP4K1Q92918 833 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms