RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 KIF23Q02241 960 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 PFKFB3Q16875 520 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 CCDC84Q86UT8 332 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 ACER1Q8TDN7 264 aa20.76■□□□□ 0.91
CDK11A-202ENST00000356937 SPZ1Q9BXG8 430 aa20.76■□□□□ 0.91
CDK11A-202ENST00000356937 RBM27Q9P2N5 1060 aaKnown RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
CDK11A-202ENST00000356937 PPP2R3BQ9Y5P8 575 aa20.76■□□□□ 0.91
CDK11A-202ENST00000356937 F5H6K3 240 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 ASNSP08243 561 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 KLRC3Q07444 240 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 TTBK2Q6IQ55 1244 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 DLK2Q6UY11 383 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 HOOK2Q96ED9 719 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 ATAD5Q96QE3 1844 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 MMP1P03956 469 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 KRT85P78386 507 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 SHISA4Q96DD7 197 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
CDK11A-202ENST00000356937 INPP5BP32019 993 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
CDK11A-202ENST00000356937 GPATCH4Q5T3I0 446 aaKnown RBP20.74■□□□□ 0.91
CDK11A-202ENST00000356937 SULF1Q8IWU6 871 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 GPKOWQ92917 476 aaPredicted RBP eCLIP20.74■□□□□ 0.91
CDK11A-202ENST00000356937 LMBRD1Q9NUN5 540 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 NDUFB10O96000 172 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 USP50Q70EL3 339 aaPredicted RBP20.74■□□□□ 0.91
CDK11A-202ENST00000356937 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 SPICE1Q8N0Z3 855 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 GMCL1P1Q8NEA9 526 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
CDK11A-202ENST00000356937 ADM5C9JUS6 153 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 CTNND1O60716 968 aaKnown RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 SLC16A2P36021 539 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 EAPPQ56P03 285 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 NUP88Q99567 741 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 BTBD18B2RXH4 712 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 SMARCA1P28370 1054 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 PRKG1Q13976 671 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 ZYXQ15942 572 aaKnown RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 SUPT20HL1Q3ZLR7 823 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 DIS3L2Q8IYB7 885 aaKnown RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 PIGSQ96S52 555 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 WRNIP1Q96S55 665 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 GLIS2Q9BZE0 524 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-202ENST00000356937 RIOX1Q9H6W3 641 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 TMX2Q9Y320 296 aa20.73■□□□□ 0.91
CDK11A-202ENST00000356937 MYH15Q9Y2K3 1946 aa20.72■□□□□ 0.91
CDK11A-202ENST00000356937 PTMSP20962 102 aa20.72■□□□□ 0.91
CDK11A-202ENST00000356937 CEBPZQ03701 1054 aaKnown RBP20.72■□□□□ 0.91
CDK11A-202ENST00000356937 KRT26Q7Z3Y9 468 aa20.72■□□□□ 0.91
CDK11A-202ENST00000356937 HEATR3Q7Z4Q2 680 aa20.72■□□□□ 0.91
CDK11A-202ENST00000356937 BRAPQ7Z569 592 aa20.72■□□□□ 0.91
CDK11A-202ENST00000356937 SEC63Q9UGP8 760 aaKnown RBP20.72■□□□□ 0.91
CDK11A-202ENST00000356937 IQCA1LA6NCM1 817 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 TPRNQ4KMQ1 711 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 ADGRF4Q8IZF3 695 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 PHF20Q9BVI0 1012 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 TAF1DQ9H5J8 278 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-202ENST00000356937 TRAK2O60296 914 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 OXER1Q8TDS5 423 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-202ENST00000356937 GOPCQ9HD26 462 aa20.71■□□□□ 0.91
CDK11A-202ENST00000356937 POTECB2RU33 542 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDK11A-202ENST00000356937 NLRP5P59047 1200 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 GMCL1Q96IK5 515 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 FTOQ9C0B1 505 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDK11A-202ENST00000356937 SYNPO2Q9UMS6 1093 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 SCN4AP35499 1836 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 SSC5DA1L4H1 1573 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 NR5A1Q13285 461 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 ZNF396Q96N95 335 aaPredicted RBP20.7■□□□□ 0.9
CDK11A-202ENST00000356937 FEZ1Q99689 392 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 ZNF112Q9UJU3 913 aa20.7■□□□□ 0.9
CDK11A-202ENST00000356937 BMP3P12645 472 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 IKQ13123 557 aaPredicted RBP20.69■□□□□ 0.9
CDK11A-202ENST00000356937 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 SPATA32Q96LK8 384 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 USP28Q96RU2 1077 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 SH2D4AQ9H788 454 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 JMJD4Q9H9V9 463 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 CFAP45Q9UL16 551 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 KRT2P35908 639 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 TYW1BQ6NUM6 668 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 ZC3H15Q8WU90 426 aaKnown RBP20.69■□□□□ 0.9
CDK11A-202ENST00000356937 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
CDK11A-202ENST00000356937 FOXP1Q9H334 677 aaPredicted RBP20.69■□□□□ 0.9
CDK11A-202ENST00000356937 BARHL2Q9NY43 387 aa20.69■□□□□ 0.9
CDK11A-202ENST00000356937 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
CDK11A-202ENST00000356937 CSPP1Q1MSJ5 1256 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms