RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 KLRC3Q07444 240 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 RESTQ13127 1097 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 SLFN13Q68D06 897 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 SPZ1Q9BXG8 430 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 GLIS2Q9BZE0 524 aaPredicted RBP21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 TMX2Q9Y320 296 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 PHIPQ8WWQ0 1821 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 NDUFB10O96000 172 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 VEGFAP15692 232 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 FOXD4L6Q3SYB3 417 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 KRT40Q6A162 431 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 FOXD4L3Q6VB84 417 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 USP48Q86UV5 1035 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 DCAF4Q8WV16 495 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 PIBF1Q8WXW3 757 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 KLRG1Q96E93 195 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 WRNIP1Q96S55 665 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 UBA5Q9GZZ9 404 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 GINM1Q9NU53 330 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 OTOFQ9HC10 1997 aa21.01■□□□□ 0.95
SMARCD3-202ENST00000356800 POTEIP0CG38 1075 aa21■□□□□ 0.95
SMARCD3-202ENST00000356800 POTEJP0CG39 1038 aa21■□□□□ 0.95
SMARCD3-202ENST00000356800 SMARCA1P28370 1054 aa21■□□□□ 0.95
SMARCD3-202ENST00000356800 TTBK2Q6IQ55 1244 aa21■□□□□ 0.95
SMARCD3-202ENST00000356800 KCTD1Q719H9 257 aa21■□□□□ 0.95
SMARCD3-202ENST00000356800 ZKSCAN4Q969J2 545 aaPredicted RBP21■□□□□ 0.95
SMARCD3-202ENST00000356800 USP2O75604 605 aaPredicted RBP20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 CCDC96Q2M329 555 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 GPATCH4Q5T3I0 446 aaKnown RBP20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 GMCL1Q96IK5 515 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 RAD21O60216 631 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 SCG2P13521 617 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 SLC1A4P43007 532 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 PRKG1Q13976 671 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 PFKFB3Q16875 520 aaPredicted RBP20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 FAM173BQ6P4H8 233 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 SCYL3Q8IZE3 742 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 CDCA5Q96FF9 252 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 NUP88Q99567 741 aaPredicted RBP20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 RIOX1Q9H6W3 641 aa20.99■□□□□ 0.95
SMARCD3-202ENST00000356800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMARCD3-202ENST00000356800 RRAGCQ9HB90 399 aa20.98■□□□□ 0.95
SMARCD3-202ENST00000356800 VPS54Q9P1Q0 977 aa20.98■□□□□ 0.95
SMARCD3-202ENST00000356800 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
SMARCD3-202ENST00000356800 KCNJ14Q9UNX9 436 aa20.98■□□□□ 0.95
SMARCD3-202ENST00000356800 SPICE1Q8N0Z3 855 aa20.97■□□□□ 0.95
SMARCD3-202ENST00000356800 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-202ENST00000356800 KIF28PB7ZC32 967 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 SLC16A2P36021 539 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 KIF23Q02241 960 aaPredicted RBP20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 TRIM29Q14134 588 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 VCPKMTQ9H867 229 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 VAT1LQ9HCJ6 419 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 GOPCQ9HD26 462 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 MMP1P03956 469 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 PTPRAP18433 802 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 ZYXQ15942 572 aaKnown RBP20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 NOL9Q5SY16 702 aaKnown RBP20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 ADGRF4Q8IZF3 695 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 GPKOWQ92917 476 aaPredicted RBP eCLIP20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 PIGSQ96S52 555 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 JMJD4Q9H9V9 463 aa20.96■□□□□ 0.95
SMARCD3-202ENST00000356800 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 BMP3P12645 472 aa20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 DNM1Q05193 864 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 RRP36Q96EU6 259 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 PHF20Q9BVI0 1012 aa20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 SH2D4AQ9H788 454 aa20.95■□□□□ 0.94
SMARCD3-202ENST00000356800 NPY5RQ15761 445 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 WWC2Q6AWC2 1192 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 TYW1BQ6NUM6 668 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 HOMER1Q86YM7 354 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 MTMR8Q96EF0 704 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 KIAA1683Q9H0B3 1180 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 PICK1Q9NRD5 415 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 LMBRD1Q9NUN5 540 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 ISY1Q9ULR0 285 aaKnown RBP20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 CLEC11AQ9Y240 323 aa20.94■□□□□ 0.94
SMARCD3-202ENST00000356800 USP17L10C9JJH3 530 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 SKOR2Q2VWA4 1001 aaPredicted RBP20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 MAP1SQ66K74 1059 aaPredicted RBP20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 FEZ1Q99689 392 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 WDR18Q9BV38 432 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 CNPY2Q9Y2B0 182 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 TMEM232C9JQI7 657 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 STXBP3O00186 592 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 PPP1R12BO60237 982 aaPredicted RBP20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 TRAK2O60296 914 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 XBP1P17861 261 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 U2AF2P26368 475 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 MAP3K9P80192 1104 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 VGLL4Q14135 290 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 FAM83BQ5T0W9 1011 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 BTNL9Q6UXG8 535 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms