RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CHD1LQ86WJ1 897 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 NAPBQ9H115 298 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 NYAP2Q9P242 653 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 PLIN4Q96Q06 1357 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 SLC15A5A6NIM6 579 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 H0YGN5 161 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 COBLO75128 1261 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 NDUFB10O96000 172 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 TFRCP02786 760 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 LRRC47Q8N1G4 583 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 TRPV1Q8NER1 839 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 HMX1Q9NP08 348 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 HOXC10Q9NYD6 342 aa19.96■□□□□ 0.79
PDLIM7-201ENST00000355572 F5H6K3 240 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 RAD21O60216 631 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 PDE4AP27815 886 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 CCNA1P78396 465 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 KLRC3Q07444 240 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 PLS1Q14651 629 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 CCAR1Q8IX12 1150 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 PAWRQ96IZ0 340 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 MCM3APO60318 1980 aa19.95■□□□□ 0.78
PDLIM7-201ENST00000355572 NMT2O60551 498 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 HOXC6P09630 235 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 ADORA2AP29274 412 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 CYP2C19P33261 490 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 AAMPQ13685 434 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 LRRFIP1Q32MZ4 808 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 LHX8Q68G74 356 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 NEDD1Q8NHV4 660 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 NBPF3Q9H094 633 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 IL17RBQ9NRM6 502 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 MTMR4Q9NYA4 1195 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 ZNF214Q9UL59 606 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 PPP1R9AQ9ULJ8 1098 aa19.94■□□□□ 0.78
PDLIM7-201ENST00000355572 VWA5AO00534 786 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 TFAP4Q01664 338 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 ZNF444Q8N0Y2 327 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 SHCBP1Q8NEM2 672 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 CWC22Q9HCG8 908 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 GOPCQ9HD26 462 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 HELLSQ9NRZ9 838 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 OGDHLQ9ULD0 1010 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 LCTP09848 1927 aa19.93■□□□□ 0.78
PDLIM7-201ENST00000355572 TRIM6-TRIM34B2RNG4 842 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 NCAPG2Q86XI2 1143 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 MKL1Q969V6 931 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 RILPL2Q969X0 211 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 NACAP1Q9BZK3 213 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 IL25Q9H293 177 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 OSBPL3Q9H4L5 887 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 RIPK3Q9Y572 518 aa19.92■□□□□ 0.78
PDLIM7-201ENST00000355572 CEP290O15078 2479 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 SLC34A2O95436 690 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 FGAP02671 866 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 MCMDC2Q4G0Z9 681 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 DPF3Q92784 378 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 COLQQ9Y215 455 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 IVNS1ABPQ9Y6Y0 642 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 PFASO15067 1338 aa19.91■□□□□ 0.78
PDLIM7-201ENST00000355572 HSPD1P10809 573 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-201ENST00000355572 SDSP20132 328 aa19.9■□□□□ 0.78
PDLIM7-201ENST00000355572 ALX1Q15699 326 aa19.9■□□□□ 0.78
PDLIM7-201ENST00000355572 RIOX2Q8IUF8 465 aa19.9■□□□□ 0.78
PDLIM7-201ENST00000355572 ANAPC4Q9UJX5 808 aa19.9■□□□□ 0.78
PDLIM7-201ENST00000355572 PGK2P07205 417 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 FGRP09769 529 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 TSPY3P0CV98 308 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 TSPY8P0CW00 308 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 CYBAP13498 195 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 HAND2P61296 217 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 PDE4BQ07343 736 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 PRAMEF19Q5SWL8 479 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 CCDC171Q6TFL3 1326 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 SLF1Q9BQI6 1058 aa19.89■□□□□ 0.77
PDLIM7-201ENST00000355572 TTLL1O95922 423 aa19.88■□□□□ 0.77
PDLIM7-201ENST00000355572 HABP4Q5JVS0 413 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-201ENST00000355572 ANO1Q5XXA6 986 aa19.88■□□□□ 0.77
PDLIM7-201ENST00000355572 TBC1D10CQ8IV04 446 aa19.88■□□□□ 0.77
PDLIM7-201ENST00000355572 MROH8Q9H579 483 aa19.88■□□□□ 0.77
PDLIM7-201ENST00000355572 GSPT1P15170 499 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 TAL1P17542 331 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 STAT3P40763 770 aa19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 SLFN13Q68D06 897 aa19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 DPP9Q86TI2 863 aa19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 GMCL1P1Q8NEA9 526 aa19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 MAML3Q96JK9 1138 aa19.87■□□□□ 0.77
PDLIM7-201ENST00000355572 LRRC37A2A6NM11 1700 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 STRNO43815 780 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 COL6A1P12109 1028 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 NOVP48745 357 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 MFSD14CQ5VZR4 134 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms