RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 RREB1Q92766 1687 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 SPAG1Q07617 926 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 SMC1AQ14683 1233 aaKnown RBP20.46■□□□□ 0.87
PDZD3-202ENST00000355547 IL17AQ16552 155 aa20.46■□□□□ 0.87
PDZD3-202ENST00000355547 HNRNPLLQ8WVV9 542 aaKnown RBP20.46■□□□□ 0.87
PDZD3-202ENST00000355547 SCG2P13521 617 aa20.46■□□□□ 0.87
PDZD3-202ENST00000355547 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
PDZD3-202ENST00000355547 RRAGBQ5VZM2 374 aa20.46■□□□□ 0.87
PDZD3-202ENST00000355547 STAMQ92783 540 aa20.46■□□□□ 0.87
PDZD3-202ENST00000355547 WTIPA6NIX2 430 aaPredicted RBP20.45■□□□□ 0.86
PDZD3-202ENST00000355547 USP17L12C9JPN9 530 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 USP17L21D6R901 530 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 MAP2K7O14733 419 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 TRIM14Q14142 442 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 LONRF2Q1L5Z9 754 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 ZNF569Q5MCW4 686 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 CTCFLQ8NI51 663 aaPredicted RBP20.45■□□□□ 0.86
PDZD3-202ENST00000355547 BLZF1Q9H2G9 400 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
PDZD3-202ENST00000355547 RAB21Q9UL25 225 aa20.45■□□□□ 0.86
PDZD3-202ENST00000355547 POTEB2H3BUK9 544 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 N4BP3O15049 544 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 POLR3GO15318 223 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 USP5P45974 858 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 COPB1P53618 953 aaKnown RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 PAK1Q13153 545 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 VPS72Q15906 364 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 PFKFB3Q16875 520 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 CAVIN4Q5BKX8 364 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ZNF658Q5TYW1 1059 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ARL6IP4Q66PJ3 421 aaKnown RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 MSANTD4Q8NCY6 345 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ANKZF1Q9H8Y5 726 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ABHD10Q9NUJ1 306 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 CTAGE9A4FU28 777 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ERICH4A6NGS2 130 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 OAS2P29728 719 aaKnown RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 ERVK-24P63145 666 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 IRX5P78411 483 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
PDZD3-202ENST00000355547 TCP11X2Q5H9J9 407 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 PIK3AP1Q6ZUJ8 805 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 C4orf32Q8N8J7 132 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 CALCOCO1Q9P1Z2 691 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 MYO1AQ9UBC5 1043 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 DOT1LQ8TEK3 1739 aa20.44■□□□□ 0.86
PDZD3-202ENST00000355547 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
PDZD3-202ENST00000355547 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 RNF225M0QZC1 329 aaPredicted RBP20.43■□□□□ 0.86
PDZD3-202ENST00000355547 SIK1P57059 783 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 NLRP5P59047 1200 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 ITPK1Q13572 414 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 CYP26C1Q6V0L0 522 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 RMND1Q9NWS8 449 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 LONP1P36776 959 aaKnown RBP20.43■□□□□ 0.86
PDZD3-202ENST00000355547 ARHGAP25P42331 645 aa20.43■□□□□ 0.86
PDZD3-202ENST00000355547 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
PDZD3-202ENST00000355547 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 SLC35F6Q8N357 371 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 ACRBPQ8NEB7 543 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 NELFBQ8WX92 580 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 NSUN4Q96CB9 384 aaKnown RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 KCNJ18B7U540 433 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 RPN1P04843 607 aaKnown RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 MCM7P33993 719 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 KCNJ12Q14500 433 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 TMED8Q6PL24 325 aaPredicted RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 MSL3Q8N5Y2 521 aaKnown RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 ANKRD20A12PQ8NF67 263 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 VPS16Q9H269 839 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 ZSWIM4Q9H7M6 989 aa20.42■□□□□ 0.86
PDZD3-202ENST00000355547 ZCCHC17Q9NP64 241 aaKnown RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 PUF60Q9UHX1 559 aaKnown RBP20.42■□□□□ 0.86
PDZD3-202ENST00000355547 PDS5AQ29RF7 1337 aaKnown RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 ADAMTS3O15072 1205 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 NMT2O60551 498 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 COBLO75128 1261 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 BEND6Q5SZJ8 279 aaPredicted RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 QTRT2Q9H974 415 aaKnown RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 DCP1AQ9NPI6 582 aaPredicted RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 A0A1B0GUL6 1792 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 H7C1D1 291 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 CALML3P27482 149 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 EVX2Q03828 476 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 WHAMMP3Q1A5X7 153 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 SBK1Q52WX2 424 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
PDZD3-202ENST00000355547 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 TAB2Q9NYJ8 693 aa20.41■□□□□ 0.86
PDZD3-202ENST00000355547 SCN7AQ01118 1682 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms