RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 BCL11BQ9C0K0 894 aaPredicted RBP24.74■■□□□ 1.55
LIMS2-202ENST00000355119 SYNRGQ9UMZ2 1314 aa24.74■■□□□ 1.55
LIMS2-202ENST00000355119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.73■■□□□ 1.55
LIMS2-202ENST00000355119 USP17L3A6NCW0 530 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 USP17L4A6NCW7 530 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 IL1R1P14778 569 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 LONP1P36776 959 aaKnown RBP24.73■■□□□ 1.55
LIMS2-202ENST00000355119 HSP90AA4PQ58FG1 418 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 USP17L1Q7RTZ2 530 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 MAPKAPK5Q8IW41 473 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 GPR101Q96P66 508 aaPredicted RBP24.73■■□□□ 1.55
LIMS2-202ENST00000355119 SAMSN1Q9NSI8 373 aaKnown RBP24.73■■□□□ 1.55
LIMS2-202ENST00000355119 GPR75-ASB3A0A0A6YYF3 556 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 ARHGAP6O43182 974 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 BTDP43251 543 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 NR1I3Q14994 352 aa24.73■■□□□ 1.55
LIMS2-202ENST00000355119 GPKOWQ92917 476 aaPredicted RBP eCLIP24.73■■□□□ 1.55
LIMS2-202ENST00000355119 RASA1P20936 1047 aa24.72■■□□□ 1.55
LIMS2-202ENST00000355119 PDXDC2PQ6P474 469 aa24.72■■□□□ 1.55
LIMS2-202ENST00000355119 C4orf32Q8N8J7 132 aa24.72■■□□□ 1.55
LIMS2-202ENST00000355119 LRRC4BQ9NT99 713 aa24.72■■□□□ 1.55
LIMS2-202ENST00000355119 SAP30BPQ9UHR5 308 aaKnown RBP24.72■■□□□ 1.55
LIMS2-202ENST00000355119 A0A1B0GTH6 734 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 PALM3A6NDB9 673 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-202ENST00000355119 ZSCAN12O43309 604 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 GTPBP6O43824 516 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-202ENST00000355119 TXLNAP40222 546 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 IL17AQ16552 155 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 SLF2Q8IX21 1173 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 UBE2Q2Q8WVN8 375 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 ERO1AQ96HE7 468 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 TMEM47Q9BQJ4 181 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 FAM205AQ6ZU69 1335 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 CCDC194A0A1B0GVG4 234 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 PPP1R3GB7ZBB8 358 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 ADAMTS3O15072 1205 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 BBOX1O75936 387 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 SERPINB2P05120 415 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 CD44P16070 742 aaKnown RBP24.71■■□□□ 1.55
LIMS2-202ENST00000355119 TMEM139Q8IV31 216 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 TEX11Q8IYF3 940 aa24.71■■□□□ 1.55
LIMS2-202ENST00000355119 M0R2N6 131 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 ONECUT3O60422 494 aaPredicted RBP24.7■■□□□ 1.54
LIMS2-202ENST00000355119 SLU7O95391 586 aaKnown RBP24.7■■□□□ 1.54
LIMS2-202ENST00000355119 GYS1P13807 737 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 CASP1P29466 404 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 C16orf86Q6ZW13 317 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 SLC44A5Q8NCS7 719 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 BAG1Q99933 345 aaPredicted RBP24.7■■□□□ 1.54
LIMS2-202ENST00000355119 UBR3Q6ZT12 1888 aa24.7■■□□□ 1.54
LIMS2-202ENST00000355119 MEX3CQ5U5Q3 659 aaKnown RBP24.69■■□□□ 1.54
LIMS2-202ENST00000355119 CDKAL1Q5VV42 579 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 WWC2Q6AWC2 1192 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 KLHL10Q6JEL2 608 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 SYT10Q6XYQ8 523 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 HOMER1Q86YM7 354 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 FAM163AQ96GL9 167 aaPredicted RBP24.69■■□□□ 1.54
LIMS2-202ENST00000355119 CTAGE1Q96RT6 745 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 RMND1Q9NWS8 449 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 BARHL2Q9NY43 387 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 PODXL2Q9NZ53 605 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 STXBP3O00186 592 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 STX10O60499 249 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 TBC1D22AQ8WUA7 517 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 CGNQ9P2M7 1197 aaKnown RBP24.69■■□□□ 1.54
LIMS2-202ENST00000355119 PCDHA6Q9UN73 950 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 PCDHA8Q9Y5H6 950 aa24.69■■□□□ 1.54
LIMS2-202ENST00000355119 DDX60LQ5H9U9 1706 aaKnown RBP24.68■■□□□ 1.54
LIMS2-202ENST00000355119 PHLPP2Q6ZVD8 1323 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 CDK8P49336 464 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 ETF1P62495 437 aaKnown RBP24.68■■□□□ 1.54
LIMS2-202ENST00000355119 GOLGA8FQ08AF8 430 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 GOLGA8DPQ0D2H9 430 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 PTPN21Q16825 1174 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 PPP4R3BQ5MIZ7 849 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 TC2NQ8N9U0 490 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 NEDD1Q8NHV4 660 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 EYA3Q99504 573 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 L2HGDHQ9H9P8 463 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 ZNF215Q9UL58 517 aaPredicted RBP24.68■■□□□ 1.54
LIMS2-202ENST00000355119 STX8Q9UNK0 236 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 CDK5RAP2Q96SN8 1893 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 SLC35G1Q2M3R5 365 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 HEATR3Q7Z4Q2 680 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 SPZ1Q9BXG8 430 aa24.68■■□□□ 1.54
LIMS2-202ENST00000355119 SNED1Q8TER0 1413 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 CYTH3O43739 400 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 HOXA10P31260 410 aaPredicted RBP24.67■■□□□ 1.54
LIMS2-202ENST00000355119 STX17P56962 302 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 FILIP1LQ4L180 1135 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 TYW1BQ6NUM6 668 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 APTXQ7Z2E3 356 aaKnown RBP24.67■■□□□ 1.54
LIMS2-202ENST00000355119 REXO1L1PQ8IX06 675 aa24.67■■□□□ 1.54
LIMS2-202ENST00000355119 GOLGA6L9A6NEM1 432 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 DTHD1Q6ZMT9 781 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 SEPT12Q8IYM1 358 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 GAKO14976 1311 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 FLT1P17948 1338 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 LAD1O00515 517 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 RASGRP4Q8TDF6 673 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms