RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MYH7P12883 1935 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ZSCAN12O43309 604 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 DYNLL1P63167 89 aaKnown RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 MAP2K1Q02750 393 aaPredicted RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 CHRNDQ07001 517 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 CASP8Q14790 479 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 FANCBQ8NB91 859 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 RABGGTAQ92696 567 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 SAMSN1Q9NSI8 373 aaKnown RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 CCP110O43303 1012 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 EVX2Q03828 476 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 PPARAQ07869 468 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 NAA25Q14CX7 972 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 DDB1Q16531 1140 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 KCNV1Q6PIU1 500 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 IQUBQ8NA54 791 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 ZNF512BQ96KM6 892 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 CSRNP2Q9H175 543 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 TNKSO95271 1327 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 CCDC151A5D8V7 595 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 RPSAP08865 295 aaKnown RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 IL6STP40189 918 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 CRKLP46109 303 aaKnown RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 TOGARAM2Q6ZUX3 1019 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 WASF1Q92558 559 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 ATP2C2O75185 946 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 SSR1P43307 286 aaKnown RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 VSNL1P62760 191 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 E2F5Q15329 346 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 GSPT2Q8IYD1 628 aaKnown RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 INTS13Q9NVM9 706 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
SMG6-202ENST00000354901 ANKRD36CQ5JPF3 1778 aa10.56□□□□□ -0.72
SMG6-202ENST00000354901 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 VWA3AA6NCI4 1184 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 KIAA0754O94854 1291 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 CLNS1AP54105 237 aaKnown RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 ALX1Q15699 326 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 VSTM4Q8IW00 320 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 FBXO2Q9UK22 296 aaPredicted RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMG6-202ENST00000354901 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 DEXIO95424 95 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 ZNF174Q15697 407 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 VPS72Q15906 364 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 SCLT1Q96NL6 688 aa10.55□□□□□ -0.72
SMG6-202ENST00000354901 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 HOOK1Q9UJC3 728 aaKnown RBP10.55□□□□□ -0.72
SMG6-202ENST00000354901 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 PTPREP23469 700 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 RILPL1Q5EBL4 403 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 VEZTQ9HBM0 779 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 GNL3LQ9NVN8 582 aaKnown RBP10.54□□□□□ -0.72
SMG6-202ENST00000354901 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ERVV-1B6SEH8 477 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 WNT7AO00755 349 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 NMT2O60551 498 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ELF1P32519 619 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 MTF1Q14872 753 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 BRD3Q15059 726 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 BEND6Q5SZJ8 279 aaPredicted RBP10.54□□□□□ -0.72
SMG6-202ENST00000354901 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 PIK3R5Q8WYR1 880 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 A0A0U1RQJ8 604 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ZNF569Q5MCW4 686 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 C4AP0C0L4 1744 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 C4BP0C0L5 1744 aa10.54□□□□□ -0.72
SMG6-202ENST00000354901 ATRNO75882 1429 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 LRRIQ3A6PVS8 624 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 ZEB2O60315 1214 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 IFIT1BQ5T764 474 aaKnown RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 ARMC3Q5W041 872 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 ESR2Q92731 530 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 BAG1Q99933 345 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 A0A087X0B3 334 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms