RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PPP1R13BQ96KQ4 1090 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 DNAJC18Q9H819 358 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 SLC12A7Q9Y666 1083 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 ARFGEF1Q9Y6D6 1849 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 CFAP100Q494V2 611 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 AXDND1Q5T1B0 1012 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 MRIQ9BWK5 157 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 ORC3Q9UBD5 711 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 hCG_1642624A0A1W2PR95 340 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 TSPY2A6NKD2 308 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 GOLGA8AA7E2F4 631 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 VEGFAP15692 232 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-204ENST00000353317 PLCG2P16885 1265 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRIM55-204ENST00000353317 GABPB1Q06547 395 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-204ENST00000353317 PDE4BQ07343 736 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 CDAN1Q8IWY9 1227 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 NUP133Q8WUM0 1156 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 TAOK3Q9H2K8 898 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 KIF2AO00139 706 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-204ENST00000353317 SLFN14P0C7P3 912 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 PFKFB1P16118 471 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 NLRP12P59046 1061 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 FUT2Q10981 343 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 ISM2Q6H9L7 571 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 SYT10Q6XYQ8 523 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 FANCBQ8NB91 859 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 LRRN4CLQ8ND94 238 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 HSD3B7Q9H2F3 369 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 L2HGDHQ9H9P8 463 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 SERPINA10Q9UK55 444 aa9.84□□□□□ -0.83
TRIM55-204ENST00000353317 SBF1O95248 1867 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 DHX16O60231 1041 aaKnown RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 PLEKHA8P1O95397 391 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 ATP1A3P13637 1013 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 LMOD1P29536 600 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 SLC35G1Q2M3R5 365 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 IFIT1BQ5T764 474 aaKnown RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 ANO1Q5XXA6 986 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 ZNF771Q7L3S4 317 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 BRAPQ7Z569 592 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 KRT222Q8N1A0 295 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 FHDC1Q9C0D6 1143 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 MKNK2Q9HBH9 465 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 ZNF446Q9NWS9 450 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 NID2Q14112 1375 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 CPLX1O14810 134 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 PCP11498 1178 aaKnown RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 CMA1P23946 247 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 MARCKSP29966 332 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 SHMT1P34896 483 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 HDLBPQ00341 1268 aaKnown RBP9.83□□□□□ -0.84
TRIM55-204ENST00000353317 ERCC6LQ2NKX8 1250 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 SYNE3Q6ZMZ3 975 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
TRIM55-204ENST00000353317 CLRN2A0PK11 232 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 ERICH2A1L162 156 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 AKR1B1P15121 316 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 KCNJ6P48051 423 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 JAG1P78504 1218 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 SART3Q15020 963 aaKnown RBP9.82□□□□□ -0.84
TRIM55-204ENST00000353317 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 NIM1KQ8IY84 436 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 IDI2Q9BXS1 227 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 FANCCQ00597 558 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 RRP1BQ14684 758 aaKnown RBP9.82□□□□□ -0.84
TRIM55-204ENST00000353317 TERF2Q15554 542 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 RTN1Q16799 776 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 CERS3Q8IU89 383 aa9.82□□□□□ -0.84
TRIM55-204ENST00000353317 CRACR2BQ8N4Y2 399 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-204ENST00000353317 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-204ENST00000353317 ADAMTS3O15072 1205 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TSPY3P0CV98 308 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TSPY8P0CW00 308 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 IFNAR1P17181 557 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TPM4P67936 248 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SLC39A14Q15043 492 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 PKN1Q16512 942 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 NBPF9Q3BBW0 867 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 ZNF444Q8N0Y2 327 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TMTC2Q8N394 836 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SRBD1Q8N5C6 995 aaKnown RBP9.81□□□□□ -0.84
TRIM55-204ENST00000353317 DPF2Q92785 391 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TMEM47Q9BQJ4 181 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SLC26A6Q9BXS9 759 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 CPVLQ9H3G5 476 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms