RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CNNM4Q6P4Q7 775 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 PCDHA7Q9UN72 937 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 GH2P01242 217 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 KANSL2Q9H9L4 492 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 GUCA1BQ9UMX6 200 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 RPL13P26373 211 aaKnown RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 TRIM28Q13263 835 aaKnown RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 NRXN1Q9ULB1 1477 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 A0A087WWV3 80 aa15.35■□□□□ 0.05
SMC6-201ENST00000351948 MRPL44Q9H9J2 332 aaKnown RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 SCAF8Q9UPN6 1271 aaKnown RBP15.35■□□□□ 0.05
SMC6-201ENST00000351948 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 DDX25Q9UHL0 483 aaKnown RBP15.34■□□□□ 0.05
SMC6-201ENST00000351948 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
SMC6-201ENST00000351948 COBLO75128 1261 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 MROH2AA6NES4 1674 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 PLEKHA8P1O95397 391 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 PAK1Q13153 545 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 ZNF34Q8IZ26 560 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 AMNQ9BXJ7 453 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 ADALQ6DHV7 355 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 MLXIPQ9HAP2 919 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 NEDD4P46934 1319 aa15.34■□□□□ 0.05
SMC6-201ENST00000351948 CCDC172P0C7W6 258 aa15.33■□□□□ 0.05
SMC6-201ENST00000351948 MXD3Q9BW11 206 aa15.33■□□□□ 0.05
SMC6-201ENST00000351948 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.33■□□□□ 0.05
SMC6-201ENST00000351948 V9GYY5 206 aaPredicted RBP15.33■□□□□ 0.05
SMC6-201ENST00000351948 CNGA1P29973 690 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 NOLC1Q14978 699 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMC6-201ENST00000351948 EEPD1Q7L9B9 569 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 PLA2G4DQ86XP0 818 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 CRACR2AQ9BSW2 395 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 EPB41P11171 864 aaKnown RBP15.33■□□□□ 0.04
SMC6-201ENST00000351948 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 OR52Z1P0C646 297 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 BMP3P12645 472 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 NDUFA8P51970 172 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 TERF1P54274 439 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 EZH2Q15910 746 aaKnown RBP15.33■□□□□ 0.04
SMC6-201ENST00000351948 METTL13Q8N6R0 699 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
SMC6-201ENST00000351948 PCP11498 1178 aaKnown RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 UBE2SQ16763 222 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 GPBP1Q86WP2 473 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 DHX37Q8IY37 1157 aaKnown RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 PDCL2Q8N4E4 241 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 KRT5P13647 590 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 FANCCQ00597 558 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 DHX36Q9H2U1 1008 aaKnown RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 MST1RQ04912 1400 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 CETN3O15182 167 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 EEF2P13639 858 aaKnown RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 RABL6Q3YEC7 729 aaPredicted RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 FAM47CQ5HY64 1035 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 NELFBQ8WX92 580 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 DCP1AQ9NPI6 582 aaPredicted RBP15.32■□□□□ 0.04
SMC6-201ENST00000351948 MEGF6O75095 1541 aa15.32■□□□□ 0.04
SMC6-201ENST00000351948 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 SUPT20HL1Q3ZLR7 823 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 CYB5R4Q7L1T6 521 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 RNF181Q9P0P0 153 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 EXOC3O60645 756 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 FMNL1O95466 1100 aaPredicted RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 STRN3Q13033 797 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 RNF26Q9BY78 433 aaPredicted RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 EIF3JO75822 258 aaKnown RBP15.31■□□□□ 0.04
SMC6-201ENST00000351948 CCDC175P0C221 793 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 ASPRV1Q53RT3 343 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
SMC6-201ENST00000351948 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 KIF5AQ12840 1032 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 LONRF3Q496Y0 759 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
SMC6-201ENST00000351948 NLRP12P59046 1061 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 GNPTABQ3T906 1256 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 FAM102BQ5T8I3 360 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 C17orf53Q8N3J3 647 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms