RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PARP1P09874 1014 aaKnown RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 SARSP49591 514 aaKnown RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 GABPAQ06546 454 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 PTGDRQ13258 359 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 USP40Q9NVE5 1235 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 SWAP70Q9UH65 585 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 PYCARDQ9ULZ3 195 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 BAZ2BQ9UIF8 2168 aaKnown RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 H0YIN7 160 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 WNT7AO00755 349 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 CYTH3O43739 400 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 FKBP1AP62942 108 aaKnown RBP19.04■□□□□ 0.64
SAMM50-201ENST00000350028 MYL5Q02045 173 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 PICALMQ13492 652 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 SLC35G1Q2M3R5 365 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 USP49Q70CQ1 688 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.64
SAMM50-201ENST00000350028 TEKT1Q969V4 418 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 PYM1Q9BRP8 204 aaKnown RBP19.04■□□□□ 0.64
SAMM50-201ENST00000350028 MRIQ9BWK5 157 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 BARHL2Q9NY43 387 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 DACH1Q9UI36 760 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 MAN1B1Q9UKM7 699 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
SAMM50-201ENST00000350028 STXBP3O00186 592 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 FOXN1O15353 648 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 ARL6IP4Q66PJ3 421 aaKnown RBP19.03■□□□□ 0.64
SAMM50-201ENST00000350028 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 WWC2Q6AWC2 1192 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 MLKLQ8NB16 471 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 CCDC12Q8WUD4 166 aaPredicted RBP19.03■□□□□ 0.64
SAMM50-201ENST00000350028 IMPACTQ9P2X3 320 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 M0R2N6 131 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 SMC2O95347 1197 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 SLFN14P0C7P3 912 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 PDILTQ8N807 584 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
SAMM50-201ENST00000350028 MTMR7Q9Y216 660 aa19.03■□□□□ 0.64
SAMM50-201ENST00000350028 R3HCC1Q9Y3T6 440 aaKnown RBP19.03■□□□□ 0.64
SAMM50-201ENST00000350028 CCDC194A0A1B0GVG4 234 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 TPM2P07951 284 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 PRR29P0C7W0 189 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 MORC3Q14149 939 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 DHX8Q14562 1220 aaKnown RBP19.02■□□□□ 0.63
SAMM50-201ENST00000350028 HEATR3Q7Z4Q2 680 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 SPATA20Q8TB22 786 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 RRP36Q96EU6 259 aaKnown RBP19.02■□□□□ 0.63
SAMM50-201ENST00000350028 EPSTI1Q96J88 318 aa19.02■□□□□ 0.63
SAMM50-201ENST00000350028 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.63
SAMM50-201ENST00000350028 IGKV6D-41A0A0C4DH26 115 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 VWA3AA6NCI4 1184 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 GOLGA8HP0CJ92 632 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 MCM7P33993 719 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 SCNN1DP51172 638 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 GSDMDP57764 484 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 TYW1BQ6NUM6 668 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 CDC42EP5Q6NZY7 148 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 SH3RF1Q7Z6J0 888 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 CACTINQ8WUQ7 758 aaKnown RBP19.01■□□□□ 0.63
SAMM50-201ENST00000350028 DHX58Q96C10 678 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 MXD3Q9BW11 206 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 OSBPL5Q9H0X9 879 aaPredicted RBP19.01■□□□□ 0.63
SAMM50-201ENST00000350028 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 IFNKQ9P0W0 207 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 SERPINB13Q9UIV8 391 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 PCDHA6Q9UN73 950 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 PCDHA8Q9Y5H6 950 aa19.01■□□□□ 0.63
SAMM50-201ENST00000350028 ADAMTS3O15072 1205 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 HLA-DOAP06340 250 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 HDLBPQ00341 1268 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 FANCCQ00597 558 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 CT47A1Q5JQC4 288 aaPredicted RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 DNTTIP2Q5QJE6 756 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 STRIP1Q5VSL9 837 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 APOBEC3HQ6NTF7 200 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 LRRC8AQ8IWT6 810 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 C17orf53Q8N3J3 647 aaPredicted RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 CNKSR1Q969H4 720 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 XPO4Q9C0E2 1151 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 C10orf71Q711Q0 1435 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 CBFA2T2O43439 604 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 BMP6P22004 513 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 LONP1P36776 959 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 CRKP46108 304 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 LRMPQ12912 555 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 C4orf32Q8N8J7 132 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 ZDHHC15Q96MV8 337 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 ZMYND12Q9H0C1 365 aa19■□□□□ 0.63
SAMM50-201ENST00000350028 SEC63Q9UGP8 760 aaKnown RBP19■□□□□ 0.63
SAMM50-201ENST00000350028 MYH8P13535 1937 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 A0A087X0B3 334 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 hCG_1984214I3L0E3 225 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 LMOD1P29536 600 aaPredicted RBP18.99■□□□□ 0.63
SAMM50-201ENST00000350028 ASPRV1Q53RT3 343 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 ZNF713Q8N859 430 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms