RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 MMTAG2Q9BU76 263 aaKnown RBP11.9□□□□□ -0.5
CAPN3-203ENST00000349748 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 ZFATQ9P243 1243 aa11.9□□□□□ -0.5
CAPN3-203ENST00000349748 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 CASP14P31944 242 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 MDH1P40925 334 aaKnown RBP11.89□□□□□ -0.51
CAPN3-203ENST00000349748 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 HVCN1Q96D96 273 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 OSBPL1AQ9BXW6 950 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 LEMD3Q9Y2U8 911 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 SPDYE5A6NIY4 337 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
CAPN3-203ENST00000349748 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-203ENST00000349748 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 GGA2Q9UJY4 613 aa11.89□□□□□ -0.51
CAPN3-203ENST00000349748 FOXN1O15353 648 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 SYKP43405 635 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ERVK-24P63145 666 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 MFSD4BQ5TF39 518 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 SYCP3Q8IZU3 236 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 GALNT15Q8N3T1 639 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 EHBP1Q8NDI1 1231 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ABCC6O95255 1503 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ZNF233A6NK53 670 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 TUBP50607 506 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 NR1I3Q14994 352 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ITSN1Q15811 1721 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ZNF18P17022 549 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 BYSLQ13895 437 aaKnown RBP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 MTHFSDQ2M296 383 aaKnown RBP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 NUGGCQ68CJ6 796 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 ATL2Q8NHH9 583 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 SEC16BQ96JE7 1060 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 LRRC1Q9BTT6 524 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 UBE2OQ9C0C9 1292 aaKnown RBP11.88□□□□□ -0.51
CAPN3-203ENST00000349748 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
CAPN3-203ENST00000349748 MFAP3LO75121 409 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 TRIM68Q6AZZ1 485 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 SSH3Q8TE77 659 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 TEKT4Q8WW24 435 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 DNAAF2Q9NVR5 837 aaKnown RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 XIRP1Q702N8 1843 aaKnown RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 M0R2C6 588 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 MAFGO15525 162 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 TOM1O60784 492 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 GCP02774 474 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 CDC25AP30304 524 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 PPARAQ07869 468 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 JAKMIP2Q96AA8 810 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 BICD1Q96G01 975 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
CAPN3-203ENST00000349748 PHACTR1Q9C0D0 580 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 PCMTD2Q9NV79 361 aa11.87□□□□□ -0.51
CAPN3-203ENST00000349748 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 MXRA7P84157 204 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CUL3Q13618 768 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 DBN1Q16643 649 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CRELD2Q6UXH1 353 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 MED15Q96RN5 788 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 RBM47A0AV96 593 aaKnown RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 N4BP3O15049 544 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CYP27B1O15528 508 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CMA1P23946 247 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 ARL10Q8N8L6 244 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 PRCCQ92733 491 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-203ENST00000349748 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms