RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TRIML1Q8N9V2 468 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 UQCRFS1P1P0C7P4 283 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 TRIM29Q14134 588 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 SPATA1Q5VX52 437 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 SUSD4Q5VX71 490 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 EP400NLQ6ZTU2 488 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 TRAPPC11Q7Z392 1133 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 MIGA1Q8NAN2 632 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 HINFPQ9BQA5 517 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 CEP83Q9Y592 693 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
SCARF1-202ENST00000348987 CCT6AP40227 531 aaKnown RBP20.98■□□□□ 0.95
SCARF1-202ENST00000348987 TTC19Q6DKK2 380 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-202ENST00000348987 USP49Q70CQ1 688 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 ZNF34Q8IZ26 560 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 CAPZA3Q96KX2 299 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 ABHD10Q9NUJ1 306 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 IQSEC3Q9UPP2 1182 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-202ENST00000348987 COBLO75128 1261 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 INPP5BP32019 993 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 ATP6V1AP38606 617 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 TOB1P50616 345 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-202ENST00000348987 SELENOOQ9BVL4 669 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 ITGB4P16144 1822 aa20.98■□□□□ 0.95
SCARF1-202ENST00000348987 MCM3P25205 808 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 CASP1P29466 404 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 FILIP1LQ4L180 1135 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 SMYD4Q8IYR2 804 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-202ENST00000348987 FBXO2Q9UK22 296 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-202ENST00000348987 SAMM50Q9Y512 469 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 SYNRGQ9UMZ2 1314 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 WTIPA6NIX2 430 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-202ENST00000348987 CCDC51Q96ER9 411 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 CAPS2Q9BXY5 557 aa20.97■□□□□ 0.95
SCARF1-202ENST00000348987 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
SCARF1-202ENST00000348987 FECHP22830 423 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 LIFRP42702 1097 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 MAP3K12Q12852 859 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 ALX1Q15699 326 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 AKNAD1Q5T1N1 836 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 CYP26C1Q6V0L0 522 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 NUP88Q99567 741 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-202ENST00000348987 TFR2Q9UP52 801 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-202ENST00000348987 ATP1A1P05023 1023 aaKnown RBP20.96■□□□□ 0.95
SCARF1-202ENST00000348987 PTPREP23469 700 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 SSRP1Q08945 709 aaKnown RBP20.96■□□□□ 0.95
SCARF1-202ENST00000348987 NR5A1Q13285 461 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 CDKAL1Q5VV42 579 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 SPATA20Q8TB22 786 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 CTAGE1Q96RT6 745 aa20.96■□□□□ 0.95
SCARF1-202ENST00000348987 GOLGA6BA6NDN3 693 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 AFMP43652 599 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 MFSD6Q6ZSS7 791 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 NOSTRINQ8IVI9 506 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 CHP1Q99653 195 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 MROH5Q6ZUA9 1318 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 LRP6O75581 1613 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 DISP2A7MBM2 1401 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 SHTN1A0MZ66 631 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 USP8P40818 1118 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 PPFIA1Q13136 1202 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 DIS3L2Q8IYB7 885 aaKnown RBP20.95■□□□□ 0.94
SCARF1-202ENST00000348987 DONSONQ9NYP3 566 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 SAR1BQ9Y6B6 198 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 MYH8P13535 1937 aa20.95■□□□□ 0.94
SCARF1-202ENST00000348987 FMNL1O95466 1100 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-202ENST00000348987 SLC5A1P13866 664 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 TDO2P48775 406 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 GNGT1P63211 74 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 CUL4BQ13620 913 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 BANK1Q8NDB2 785 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 SUFUQ9UMX1 484 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 REXO2Q9Y3B8 237 aaKnown RBP20.94■□□□□ 0.94
SCARF1-202ENST00000348987 SLC4A4Q9Y6R1 1079 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 GRIN2DO15399 1336 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 ERVV-1B6SEH8 477 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 EIF3HO15372 352 aaKnown RBP eCLIP20.94■□□□□ 0.94
SCARF1-202ENST00000348987 KCNQ2O43526 872 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 IL6STP40189 918 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-202ENST00000348987 CCNI2Q6ZMN8 369 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-202ENST00000348987 ADGRA1Q86SQ6 560 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 CAPN7Q9Y6W3 813 aa20.94■□□□□ 0.94
SCARF1-202ENST00000348987 IFNAR1P17181 557 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 OXER1Q8TDS5 423 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 ROBO1Q9Y6N7 1651 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 MYH3P11055 1940 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 CCDC196A0A1B0GTZ2 297 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 TARSL2A2RTX5 802 aaKnown RBP20.93■□□□□ 0.94
SCARF1-202ENST00000348987 N4BP3O15049 544 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 MMP1P03956 469 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 CNPY4Q8N129 248 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 SDR42E1Q8WUS8 393 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 JPH2Q9BR39 696 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-202ENST00000348987 VPS16Q9H269 839 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 PCDHB6Q9Y5E3 794 aa20.93■□□□□ 0.94
SCARF1-202ENST00000348987 PSMD14O00487 310 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 KRT9P35527 623 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms