RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CCDC144BQ3MJ40 725 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 GALNT17Q6IS24 598 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 CCDC148Q8NFR7 591 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 CEP95Q96GE4 821 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 ADAMTS3O15072 1205 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 HHIPL2Q6UWX4 724 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 C17orf53Q8N3J3 647 aaPredicted RBP23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 PDILTQ8N807 584 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 DAGLBQ8NCG7 672 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 CAMKK2Q96RR4 588 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 USP40Q9NVE5 1235 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 BARHL2Q9NY43 387 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 PLIN4Q96Q06 1357 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 M0R2N6 131 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 PARP1P09874 1014 aaKnown RBP23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 WWC2Q6AWC2 1192 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 TYW1BQ6NUM6 668 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 PODNQ7Z5L7 613 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 SYMPKQ92797 1274 aaKnown RBP23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 EPSTI1Q96J88 318 aa23.23■■□□□ 1.31
CHRNA3-202ENST00000348639 SMARCA1P28370 1054 aa23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 MYL5Q02045 173 aa23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 DDX4Q9NQI0 724 aaKnown RBP23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 MAN1B1Q9UKM7 699 aa23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
CHRNA3-202ENST00000348639 STXBP3O00186 592 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 PRR29P0C7W0 189 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 GOLGA8HP0CJ92 632 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 BMP6P22004 513 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 LRMPQ12912 555 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 TRIML1Q8N9V2 468 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 SMARCE1Q969G3 411 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 TEKT1Q969V4 418 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 HEATR3Q7Z4Q2 680 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 SPATA20Q8TB22 786 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 CACTINQ8WUQ7 758 aaKnown RBP23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 HSD3B7Q9H2F3 369 aa23.21■■□□□ 1.31
CHRNA3-202ENST00000348639 A0A087X0B3 334 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 VWA3AA6NCI4 1184 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 NEMFO60524 1076 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 SLFN14P0C7P3 912 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 MCM7P33993 719 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 DHX58Q96C10 678 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 SLX4Q8IY92 1834 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 MORC3Q14149 939 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 ARL6IP4Q66PJ3 421 aaKnown RBP23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 RASGRP2Q7LDG7 609 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 MTMR4Q9NYA4 1195 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 SWAP70Q9UH65 585 aa23.2■■□□□ 1.3
CHRNA3-202ENST00000348639 MYO1BO43795 1136 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 APOBEC3HQ6NTF7 200 aaKnown RBP23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 CDC42EP5Q6NZY7 148 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 USP17L2Q6R6M4 530 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 KIAA0825Q8IV33 1275 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 LRRC8AQ8IWT6 810 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 GRAMD1CQ8IYS0 662 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 MLKLQ8NB16 471 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 XPO4Q9C0E2 1151 aaKnown RBP23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 IFNKQ9P0W0 207 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 IMPACTQ9P2X3 320 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 PCDHA6Q9UN73 950 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 PCDHA8Q9Y5H6 950 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 MYO3BQ8WXR4 1341 aa23.19■■□□□ 1.3
CHRNA3-202ENST00000348639 CCDC194A0A1B0GVG4 234 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 ECE2O60344 883 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 LMOD1P29536 600 aaPredicted RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 SH3RF1Q7Z6J0 888 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 OSBPL5Q9H0X9 879 aaPredicted RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 DACH1Q9UI36 760 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 SERPINB13Q9UIV8 391 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 ADAMTSL1Q8N6G6 1762 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 IGKV6D-41A0A0C4DH26 115 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 SMC2O95347 1197 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 FKBP1AP62942 108 aaKnown RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 DNTTIP2Q5QJE6 756 aaKnown RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 RASGRP4Q8TDF6 673 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 CCDC12Q8WUD4 166 aaPredicted RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 MRIQ9BWK5 157 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 ZMYND12Q9H0C1 365 aa23.18■■□□□ 1.3
CHRNA3-202ENST00000348639 CRKP46108 304 aa23.17■■□□□ 1.3
CHRNA3-202ENST00000348639 FANCCQ00597 558 aa23.17■■□□□ 1.3
CHRNA3-202ENST00000348639 TPM2P07951 284 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 RBM5P52756 815 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 GSDMDP57764 484 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 IL17AQ16552 155 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 AOC3Q16853 763 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 STRIP1Q5VSL9 837 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 FILIP1Q7Z7B0 1213 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 PAGE5Q96GU1 130 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 PYM1Q9BRP8 204 aaKnown RBP23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 PDGFDQ9GZP0 370 aaPredicted RBP23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 CPVLQ9H3G5 476 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 USP17L5A8MUK1 530 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms