RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZNF473Q8WTR7 871 aaKnown RBP17.17■□□□□ 0.34
LMNA-201ENST00000347559 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
LMNA-201ENST00000347559 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 CEP131Q9UPN4 1083 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 PDHBP11177 359 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
LMNA-201ENST00000347559 TRIM22Q8IYM9 498 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 EHBP1Q8NDI1 1231 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 STAG1Q8WVM7 1258 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 NELFBQ8WX92 580 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 GSDMAQ96QA5 445 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
LMNA-201ENST00000347559 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
LMNA-201ENST00000347559 EYA2O00167 538 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 CCDC181Q5TID7 509 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 PCMTD1Q96MG8 357 aaPredicted RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 SLC40A1Q9NP59 571 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 SKOR1P84550 965 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 PAK1Q13153 545 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 E7EVH7 732 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
LMNA-201ENST00000347559 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 PPANQ9NQ55 473 aaKnown RBP17.16■□□□□ 0.34
LMNA-201ENST00000347559 FMNL1O95466 1100 aaPredicted RBP17.15■□□□□ 0.34
LMNA-201ENST00000347559 HPDP32754 393 aaPredicted RBP17.15■□□□□ 0.34
LMNA-201ENST00000347559 EPHB4P54760 987 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 FOXO4P98177 505 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 SPAG1Q07617 926 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 WDR59Q6PJI9 974 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 IFT81Q8WYA0 676 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 WASF1Q92558 559 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 CCT8L2Q96SF2 557 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 LY9Q9HBG7 655 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 C21orf2O43822 256 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 DNA2P51530 1060 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 CLNS1AP54105 237 aaKnown RBP17.15■□□□□ 0.34
LMNA-201ENST00000347559 CFAP58Q5T655 872 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 EPN3Q9H201 632 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 VCPKMTQ9H867 229 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 MAP3K15Q6ZN16 1313 aa17.15■□□□□ 0.34
LMNA-201ENST00000347559 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.34
LMNA-201ENST00000347559 ESYT3A0FGR9 886 aa17.14■□□□□ 0.34
LMNA-201ENST00000347559 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.34
LMNA-201ENST00000347559 RPSAP08865 295 aaKnown RBP17.14■□□□□ 0.34
LMNA-201ENST00000347559 CYLC1P35663 651 aaPredicted RBP17.14■□□□□ 0.34
LMNA-201ENST00000347559 SPATA4Q8NEY3 305 aa17.14■□□□□ 0.34
LMNA-201ENST00000347559 GDAQ9Y2T3 454 aa17.14■□□□□ 0.34
LMNA-201ENST00000347559 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 SMTNP53814 917 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 KIF5AQ12840 1032 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 KRT26Q7Z3Y9 468 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 SPATS2Q86XZ4 545 aaKnown RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 AGPAT5Q9NUQ2 364 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 ZNHIT6Q9NWK9 470 aaKnown RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 TRIM21P19474 475 aaKnown RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 ZNF174Q15697 407 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 ALS2CLQ60I27 953 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 NFRKBQ6P4R8 1299 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 NLRP14Q86W24 1093 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 CREG2Q8IUH2 290 aa17.14■□□□□ 0.33
LMNA-201ENST00000347559 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.33
LMNA-201ENST00000347559 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
LMNA-201ENST00000347559 NR1D1P20393 614 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 CCDC121Q6ZUS5 278 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
LMNA-201ENST00000347559 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 LRRC10BA6NIK2 292 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 PPP1R37O75864 691 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 SNCBQ16143 134 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 PTGISQ16647 500 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 MB21D1Q8N884 522 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 MLXIPQ9HAP2 919 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 STIM2Q9P246 746 aa17.13■□□□□ 0.33
LMNA-201ENST00000347559 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
LMNA-201ENST00000347559 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
LMNA-201ENST00000347559 CASP7P55210 303 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms