RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 FBXO2Q9UK22 296 aaPredicted RBP19.6■□□□□ 0.73
SMARCC2-202ENST00000347471 SNAP25P60880 206 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 RESP18Q5W5W9 173 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 KRBA2Q6ZNG9 492 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 OSBPL5Q9H0X9 879 aaPredicted RBP19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 PRR29P0C7W0 189 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 PTPREP23469 700 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 LRMPQ12912 555 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 GRM4Q14833 912 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 TRMT44Q8IYL2 757 aaKnown RBP19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 CAMKK2Q96RR4 588 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 UBR3Q6ZT12 1888 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 GAKO14976 1311 aa19.59■□□□□ 0.73
SMARCC2-202ENST00000347471 SMCO2A6NFE2 343 aa19.58■□□□□ 0.73
SMARCC2-202ENST00000347471 DDTLA6NHG4 134 aaPredicted RBP19.58■□□□□ 0.73
SMARCC2-202ENST00000347471 DPEP1P16444 411 aa19.58■□□□□ 0.73
SMARCC2-202ENST00000347471 BLZF1Q9H2G9 400 aa19.58■□□□□ 0.73
SMARCC2-202ENST00000347471 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
SMARCC2-202ENST00000347471 MARCH6O60337 910 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 ZYXQ15942 572 aaKnown RBP19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 HOOK1Q9UJC3 728 aaKnown RBP19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 DOCK2Q92608 1830 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 CALML3P27482 149 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 STX17P56962 302 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 CCDC178Q5BJE1 867 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 RBM43Q6ZSC3 357 aaKnown RBP19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 CERS3Q8IU89 383 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 SPICE1Q8N0Z3 855 aa19.58■□□□□ 0.72
SMARCC2-202ENST00000347471 CDK11BP21127 795 aaKnown RBP19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 ZNF75DP51815 510 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 TPM4P67936 248 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 SLC35G1Q2M3R5 365 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 CFAP100Q494V2 611 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 METTL16Q86W50 562 aaKnown RBP19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 COL24A1Q17RW2 1714 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 SERPINC1P01008 464 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 SMARCE1Q969G3 411 aa19.57■□□□□ 0.72
SMARCC2-202ENST00000347471 SMYD4Q8IYR2 804 aaPredicted RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 FAM163AQ96GL9 167 aaPredicted RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 MTMR4Q9NYA4 1195 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 PP2D1A8MPX8 630 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 TNNI2P48788 182 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 ARID5BQ14865 1188 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 POSTNQ15063 836 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 OGFOD1Q8N543 542 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 NUP88Q99567 741 aaPredicted RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 TMOD2Q9NZR1 351 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 IFNKQ9P0W0 207 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 CERKLQ49MI3 558 aaPredicted RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 CCDC148Q8NFR7 591 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 TMEM260Q9NX78 707 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 MAPK8IP1Q9UQF2 711 aa19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 SRPRBQ9Y5M8 271 aaKnown RBP19.56■□□□□ 0.72
SMARCC2-202ENST00000347471 CCNT1O60563 726 aaKnown RBP19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 IQCB1Q15051 598 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 PCDHA4Q9UN74 947 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 NLRP12P59046 1061 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 DACT2Q5SW24 774 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 STRIP1Q5VSL9 837 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 ATP1A3P13637 1013 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 SEPT2Q15019 361 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 STYK1Q6J9G0 422 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 MIGA2Q7L4E1 593 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
SMARCC2-202ENST00000347471 ZNF831Q5JPB2 1677 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 DHX40Q8IX18 779 aaKnown RBP19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 TTLL1O95922 423 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 NPY5RQ15761 445 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 CCDC34Q96HJ3 373 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 PDHBP11177 359 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 SLC1A4P43007 532 aa19.54■□□□□ 0.72
SMARCC2-202ENST00000347471 KARSQ15046 597 aaKnown RBP19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 PALM3A6NDB9 673 aaPredicted RBP19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 UBE2SQ16763 222 aa19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 C6orf50Q9HD87 102 aa19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 PYCARDQ9ULZ3 195 aa19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 SHMT1P34896 483 aa19.53■□□□□ 0.72
SMARCC2-202ENST00000347471 YDJCA8MPS7 323 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 HHIPL2Q6UWX4 724 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 HPSEQ9Y251 543 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 BCS1LQ9Y276 419 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 A0A087X0B3 334 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 UBA7P41226 1012 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 USH1GQ495M9 461 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 TMC6Q7Z403 805 aa19.52■□□□□ 0.72
SMARCC2-202ENST00000347471 TXLNAP40222 546 aa19.52■□□□□ 0.71
SMARCC2-202ENST00000347471 TPD52L1Q16890 204 aaPredicted RBP19.52■□□□□ 0.71
SMARCC2-202ENST00000347471 USP17L10C9JJH3 530 aa19.51■□□□□ 0.71
SMARCC2-202ENST00000347471 STXBP3O00186 592 aa19.51■□□□□ 0.71
SMARCC2-202ENST00000347471 PSMD14O00487 310 aa19.51■□□□□ 0.71
SMARCC2-202ENST00000347471 EEF2P13639 858 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms