RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 ELP1O95163 1332 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 MYH8P13535 1937 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 F5H6K3 240 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 XBP1P17861 261 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 ATP2B2Q01814 1243 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 KLRC3Q07444 240 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 GMCL1P1Q8NEA9 526 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 CPVLQ9H3G5 476 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 GINM1Q9NU53 330 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
ECM1-201ENST00000346569 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
ECM1-201ENST00000346569 PITPNM2Q9BZ72 1349 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
ECM1-201ENST00000346569 SAFBQ15424 915 aaKnown RBP eCLIP12.67□□□□□ -0.38
ECM1-201ENST00000346569 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
ECM1-201ENST00000346569 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
ECM1-201ENST00000346569 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 FIBPO43427 364 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
ECM1-201ENST00000346569 ASNSP08243 561 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 KCNA4P22459 653 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
ECM1-201ENST00000346569 UBE2HP62256 183 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
ECM1-201ENST00000346569 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
ECM1-201ENST00000346569 NDUFB10O96000 172 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 ECE1P42892 770 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 NASPP49321 788 aaPredicted RBP12.65□□□□□ -0.38
ECM1-201ENST00000346569 NR5A1Q13285 461 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 WWC2Q6AWC2 1192 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 KCTD1Q719H9 257 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 ADGRF4Q8IZF3 695 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
ECM1-201ENST00000346569 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 PIGSQ96S52 555 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
ECM1-201ENST00000346569 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
ECM1-201ENST00000346569 POTECB2RU33 542 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 M0R2N6 131 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 STXBP3O00186 592 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 MBD3O95983 291 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 SLC1A4P43007 532 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 TOB1P50616 345 aaPredicted RBP12.64□□□□□ -0.39
ECM1-201ENST00000346569 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
ECM1-201ENST00000346569 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
ECM1-201ENST00000346569 ARHGEF10LQ9HCE6 1279 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 CLIC4Q9Y696 253 aa12.64□□□□□ -0.39
ECM1-201ENST00000346569 MYH6P13533 1939 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 hCG_1984214I3L0E3 225 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 YEATS4O95619 227 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 BMP3P12645 472 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 CALML3P27482 149 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 INPP5BP32019 993 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 KRT2P35908 639 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 NLRP5P59047 1200 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
ECM1-201ENST00000346569 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 PTPAQ15257 358 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 EARS2Q5JPH6 523 aaKnown RBP12.63□□□□□ -0.39
ECM1-201ENST00000346569 ANO1Q5XXA6 986 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 GALNT17Q6IS24 598 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms