RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
CDK5RAP1-202ENST00000346416 BARHL2Q9NY43 387 aa16.14■□□□□ 0.17
CDK5RAP1-202ENST00000346416 HLA-DOAP06340 250 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SHMT1P34896 483 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 RBM5P52756 815 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PTGDRQ13258 359 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CC2D2BQ6DHV5 1058 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ISM2Q6H9L7 571 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SARM1Q6SZW1 724 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ELOA2Q8IYF1 753 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CCDC148Q8NFR7 591 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 TTC12Q9H892 705 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 IGKV6D-41A0A0C4DH26 115 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 USP17L5A8MUK1 530 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 STXBP3O00186 592 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 C21orf2O43822 256 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CACNB3P54284 484 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ATP2C1P98194 919 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 HDLBPQ00341 1268 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PDILTQ8N807 584 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
CDK5RAP1-202ENST00000346416 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 M0R2N6 131 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FOXN1O15353 648 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CLEC10AQ8IUN9 316 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 RASGRP4Q8TDF6 673 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SERTAD1Q9UHV2 236 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PDHBP11177 359 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SMARCA1P28370 1054 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 MCM7P33993 719 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 TCP10Q12799 353 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 GALNT17Q6IS24 598 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 HOMER1Q86YM7 354 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 LRRC47Q8N1G4 583 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 EPSTI1Q96J88 318 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 TTLL1O95922 423 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SF3B2Q13435 895 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 RRP36Q96EU6 259 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 EHD4Q9H223 541 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 VAT1LQ9HCJ6 419 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SERPINA10Q9UK55 444 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PCDHA6Q9UN73 950 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PCDHA8Q9Y5H6 950 aa16.11■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 BAG6P46379 1132 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 POSTNQ15063 836 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 IDI2Q9BXS1 227 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 TPM3P06753 285 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 NAPAP54920 295 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PIGSQ96S52 555 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FAM198AQ9UFP1 575 aa16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP1-202ENST00000346416 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 A0A087X0B3 334 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 MPHOSPH10O00566 681 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 MRFAP1L1Q96HT8 127 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 RIOX1Q9H6W3 641 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DNAJC18Q9H819 358 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 CDC25BP30305 580 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 DHX58Q96C10 678 aa16.09■□□□□ 0.17
CDK5RAP1-202ENST00000346416 PTGS1P23219 599 aa16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NCAPHQ15003 741 aa16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KCNF1Q9H3M0 494 aa16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms