RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 REPS2Q8NFH8 660 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 TCP11L1Q9NUJ3 509 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 PPP1R9AQ9ULJ8 1098 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 CHMLP26374 656 aa23.5■■□□□ 1.35
CLTA-202ENST00000345519 SPATC1LQ9H0A9 340 aa23.5■■□□□ 1.35
CLTA-202ENST00000345519 INCENPQ9NQS7 918 aa23.5■■□□□ 1.35
CLTA-202ENST00000345519 CLIP2Q9UDT6 1046 aa23.5■■□□□ 1.35
CLTA-202ENST00000345519 TSPY2A6NKD2 308 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 ATP2B2Q01814 1243 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 GRB14Q14449 540 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 AKNAD1Q5T1N1 836 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 PLEKHH3Q7Z736 793 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 TBC1D10CQ8IV04 446 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 ATG4CQ96DT6 458 aa23.49■■□□□ 1.35
CLTA-202ENST00000345519 IGHA2P01877 340 aa23.48■■□□□ 1.35
CLTA-202ENST00000345519 MLLT1Q03111 559 aaPredicted RBP23.48■■□□□ 1.35
CLTA-202ENST00000345519 GMCL1Q96IK5 515 aa23.48■■□□□ 1.35
CLTA-202ENST00000345519 NUDT12Q9BQG2 462 aa23.48■■□□□ 1.35
CLTA-202ENST00000345519 MOV10L1Q9BXT6 1211 aaKnown RBP23.48■■□□□ 1.35
CLTA-202ENST00000345519 FBXO28Q9NVF7 368 aa23.48■■□□□ 1.35
CLTA-202ENST00000345519 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
CLTA-202ENST00000345519 SMCHD1A6NHR9 2005 aa23.48■■□□□ 1.35
CLTA-202ENST00000345519 LCTP09848 1927 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 MYH6P13533 1939 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 VWA5AO00534 786 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 HOXC6P09630 235 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 ELNP15502 786 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 TMEM132BQ14DG7 1078 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 MTFR1Q15390 333 aa23.47■■□□□ 1.35
CLTA-202ENST00000345519 RNF41Q9H4P4 317 aaPredicted RBP23.47■■□□□ 1.35
CLTA-202ENST00000345519 SLC15A5A6NIM6 579 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 HMGCRP04035 888 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 INHAP05111 366 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 PTPREP23469 700 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 NEDD4P46934 1319 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 HAND2P61296 217 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 UBXN2AP68543 259 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 MAP3K21Q5TCX8 1036 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 LRRC47Q8N1G4 583 aaKnown RBP23.46■■□□□ 1.35
CLTA-202ENST00000345519 TRIB2Q92519 343 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 APBA2Q99767 749 aa23.46■■□□□ 1.35
CLTA-202ENST00000345519 PAK6Q9NQU5 681 aaPredicted RBP23.46■■□□□ 1.35
CLTA-202ENST00000345519 ALPK3Q96L96 1907 aa23.45■■□□□ 1.35
CLTA-202ENST00000345519 ATP2A1O14983 1001 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 SGSM2O43147 1006 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 RANBP6O60518 1105 aaKnown RBP23.45■■□□□ 1.34
CLTA-202ENST00000345519 NMT2O60551 498 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 PLA2G6O60733 806 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 MFSD6Q6ZSS7 791 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 TRMT44Q8IYL2 757 aaKnown RBP23.45■■□□□ 1.34
CLTA-202ENST00000345519 ABRAQ8N0Z2 381 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 NKX2-3Q8TAU0 364 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 RUFY2Q8WXA3 655 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
CLTA-202ENST00000345519 SLF1Q9BQI6 1058 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 TMEM106CQ9BVX2 250 aa23.45■■□□□ 1.34
CLTA-202ENST00000345519 ZNF213O14771 459 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 STRNO43815 780 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 GJB1P08034 283 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 CCL5P13501 91 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 CAPN2P17655 700 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 RGS2P41220 211 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 MAP2K5Q13163 448 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 BMP2KLQ5H9B9 411 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 RCSD1Q6JBY9 416 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.44■■□□□ 1.34
CLTA-202ENST00000345519 PRPF38AQ8NAV1 312 aaKnown RBP23.44■■□□□ 1.34
CLTA-202ENST00000345519 SHISA4Q96DD7 197 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 MROH8Q9H579 483 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 CTNNA3Q9UI47 895 aa23.44■■□□□ 1.34
CLTA-202ENST00000345519 SLC25A27O95847 323 aa23.43■■□□□ 1.34
CLTA-202ENST00000345519 GJA8P48165 433 aa23.43■■□□□ 1.34
CLTA-202ENST00000345519 RIOX2Q8IUF8 465 aa23.43■■□□□ 1.34
CLTA-202ENST00000345519 FEM1BQ9UK73 627 aa23.43■■□□□ 1.34
CLTA-202ENST00000345519 STX8Q9UNK0 236 aa23.43■■□□□ 1.34
CLTA-202ENST00000345519 DNAH12Q6ZR08 3092 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 MCM3APO60318 1980 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 BMP3P12645 472 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 ERCC3P19447 782 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 IMMTQ16891 758 aaKnown RBP23.42■■□□□ 1.34
CLTA-202ENST00000345519 SLFN13Q68D06 897 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 TTC14Q96N46 770 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 SLC38A10Q9HBR0 1119 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 LRRC37A2A6NM11 1700 aa23.42■■□□□ 1.34
CLTA-202ENST00000345519 FDX1P10109 184 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 EN2P19622 333 aaPredicted RBP23.41■■□□□ 1.34
CLTA-202ENST00000345519 CYP2B6P20813 491 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 COPB2P35606 906 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 UBE2Q1Q7Z7E8 422 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 CCAR1Q8IX12 1150 aaKnown RBP23.41■■□□□ 1.34
CLTA-202ENST00000345519 ESR2Q92731 530 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 UNC93B1Q9H1C4 597 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 IVNS1ABPQ9Y6Y0 642 aa23.41■■□□□ 1.34
CLTA-202ENST00000345519 TOP1P11387 765 aaKnown RBP23.4■■□□□ 1.34
CLTA-202ENST00000345519 OAZ1P54368 228 aa23.4■■□□□ 1.34
CLTA-202ENST00000345519 CRISPLD2Q9H0B8 497 aa23.4■■□□□ 1.34
CLTA-202ENST00000345519 RPTORQ8N122 1335 aa23.39■■□□□ 1.34
CLTA-202ENST00000345519 SNHG28P0DPA3 235 aa23.39■■□□□ 1.33
CLTA-202ENST00000345519 STAT2P52630 851 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms