RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 BCRP11274 1271 aa24.43■■□□□ 1.5
SMARCB1-202ENST00000344921 ERO1AQ96HE7 468 aa24.43■■□□□ 1.5
SMARCB1-202ENST00000344921 IKQ13123 557 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 CCDC96Q2M329 555 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 TSGA10IPQ3SY00 556 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 PNMA1Q8ND90 353 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 CD99L2Q8TCZ2 262 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 GMCL1Q96IK5 515 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 FBXO28Q9NVF7 368 aa24.42■■□□□ 1.5
SMARCB1-202ENST00000344921 SPDYE16A6NNV3 312 aaPredicted RBP24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 PRC1O43663 620 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 FAM110CQ1W6H9 321 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 TMEM67Q5HYA8 995 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 KCTD1Q719H9 257 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 DSG3P32926 999 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 WTAPQ15007 396 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 ADCK5Q3MIX3 580 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 ANKS1AQ92625 1134 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 SNX14Q9Y5W7 946 aa24.41■■□□□ 1.5
SMARCB1-202ENST00000344921 TMEM232C9JQI7 657 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 PEX10O60683 326 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 ANTXR2P58335 489 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 LACTBP83111 547 aaPredicted RBP24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 SEC23AQ15436 765 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 RASGRP2Q7LDG7 609 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 DCAF4Q8WV16 495 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 SLF1Q9BQI6 1058 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 RBPJLQ9UBG7 517 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 FEM1BQ9UK73 627 aa24.4■■□□□ 1.5
SMARCB1-202ENST00000344921 GPRC5AQ8NFJ5 357 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 KCNB2Q92953 911 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 KIFC2Q96AC6 838 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 ATG4CQ96DT6 458 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 TXNRD2Q9NNW7 524 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 PPP1R9AQ9ULJ8 1098 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 RABGAP1Q9Y3P9 1069 aa24.39■■□□□ 1.5
SMARCB1-202ENST00000344921 MYPNQ86TC9 1320 aa24.39■■□□□ 1.49
SMARCB1-202ENST00000344921 STAT2P52630 851 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 ARHGEF6Q15052 776 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 LBX2Q6XYB7 198 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 CCAR1Q8IX12 1150 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 PRPF38AQ8NAV1 312 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 JAKMIP1Q96N16 626 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 CTDP1Q9Y5B0 961 aaPredicted RBP24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 HMGB1P09429 215 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 PDHBP11177 359 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 ERVK-9P63128 1117 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 ERVK-24P63145 666 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 C8orf34Q49A92 452 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 IGDCC4Q8TDY8 1250 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 CHURC1Q8WUH1 139 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 TMEM87BQ96K49 555 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 MORF4L1Q9UBU8 362 aa24.38■■□□□ 1.49
SMARCB1-202ENST00000344921 FRMPD2Q68DX3 1309 aaPredicted RBP24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 FMNL1O95466 1100 aaPredicted RBP24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 PSMC4P43686 418 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 COL9A3Q14050 684 aaPredicted RBP24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 PLS1Q14651 629 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 MB21D1Q8N884 522 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 LRRC2Q9BYS8 371 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 ARHGAP39Q9C0H5 1083 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 GPCPD1Q9NPB8 672 aa24.37■■□□□ 1.49
SMARCB1-202ENST00000344921 SEC24BO95487 1268 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 PSMA5P28066 241 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 Q3C1V9 767 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 NFXL1Q6ZNB6 911 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 DHX32Q7L7V1 743 aaKnown RBP24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 FAM160B2Q86V87 743 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 MTA3Q9BTC8 594 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 EFCC1Q9HA90 598 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 BTBD7Q9P203 1132 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 TRIM17Q9Y577 477 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 RLFQ13129 1914 aa24.36■■□□□ 1.49
SMARCB1-202ENST00000344921 FCGRTP55899 365 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 CCNA1P78396 465 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 POTEEQ6S8J3 1075 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 SENP2Q9HC62 589 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 PARP14Q460N5 1801 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 VWA5AO00534 786 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 FGD1P98174 961 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 BLOC1S2Q6QNY1 142 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 CTU1Q7Z7A3 348 aaKnown RBP24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 TMTC2Q8N394 836 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 TCEANC2Q96MN5 208 aa24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 CWC22Q9HCG8 908 aaKnown RBP24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 GPHNQ9NQX3 736 aaPredicted RBP24.35■■□□□ 1.49
SMARCB1-202ENST00000344921 CCDC69A6NI79 296 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 ZBED4O75132 1171 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 CNMDO75829 334 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 GOLGA8HP0CJ92 632 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 CASTP20810 708 aaKnown RBP24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 ZNF543Q08ER8 600 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 COL13A1Q5TAT6 717 aaPredicted RBP24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 CATIPQ7Z7H3 387 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 LY9Q9HBG7 655 aa24.34■■□□□ 1.49
SMARCB1-202ENST00000344921 SH2B2O14492 632 aaPredicted RBP24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 TNPO2O14787 897 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 SNHG28P0DPA3 235 aa24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 CPA1P15085 419 aa24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 SLC16A2P36021 539 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms