RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ALX1Q15699 326 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 Q3C1V9 767 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 MAP4K1Q92918 833 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 ARMC5Q96C12 935 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 ZNF333Q96JL9 665 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.19
TPM4-202ENST00000344824 DSCC1Q9BVC3 393 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 PORCNQ9H237 461 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 NYAP2Q9P242 653 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 MTMR7Q9Y216 660 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■■■■ 29.8
TPM4-202ENST00000344824 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
TPM4-202ENST00000344824 CNMDO75829 334 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 CCNA1P78396 465 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 COG2Q14746 738 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 NEDD1Q8NHV4 660 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 BTBD7Q9P203 1132 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 STX8Q9UNK0 236 aa16.26■□□□□ 0.19
TPM4-202ENST00000344824 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 TTLL1O95922 423 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 MAPK4P31152 587 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 TACC3Q9Y6A5 838 aa16.25■□□□□ 0.19
TPM4-202ENST00000344824 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 NMT2O60551 498 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 NDUFB10O96000 172 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 CYP2B6P20813 491 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 DSG3P32926 999 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 HSPA4P34932 840 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 UBXN2AP68543 259 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 CREB3L3Q68CJ9 461 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 PLEKHH3Q7Z736 793 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 PLXNA1Q9UIW2 1896 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 BRCA2P51587 3418 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
TPM4-202ENST00000344824 F5H6K3 240 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 ZNF213O14771 459 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 SLC27A2O14975 620 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 ORC4O43929 436 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
TPM4-202ENST00000344824 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
TPM4-202ENST00000344824 KLRC3Q07444 240 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 MTFR1Q15390 333 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 RBM19Q9Y4C8 960 aaKnown RBP16.23■□□□□ 0.19
TPM4-202ENST00000344824 NEDD4P46934 1319 aa16.23■□□□□ 0.19
TPM4-202ENST00000344824 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
TPM4-202ENST00000344824 INHAP05111 366 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
TPM4-202ENST00000344824 NECTIN1Q15223 517 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 AKNAD1Q5T1N1 836 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 SOCS4Q8WXH5 440 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
TPM4-202ENST00000344824 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
TPM4-202ENST00000344824 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
TPM4-202ENST00000344824 ZNF236Q9UL36 1845 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 IRF5Q13568 498 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
TPM4-202ENST00000344824 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 NCAPG2Q86XI2 1143 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 MB21D1Q8N884 522 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 STAG1Q8WVM7 1258 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 MOV10L1Q9BXT6 1211 aaKnown RBP16.21■□□□□ 0.19
TPM4-202ENST00000344824 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 SPATC1LQ9H0A9 340 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 PPP1R9AQ9ULJ8 1098 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
TPM4-202ENST00000344824 CCL5P13501 91 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 RGS2P41220 211 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 RASGRP2Q7LDG7 609 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 KIFC2Q96AC6 838 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 MYH6P13533 1939 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 TNRC18O15417 2968 aaPredicted RBP16.2■□□□□ 0.18
TPM4-202ENST00000344824 FRMPD3Q5JV73 1810 aa16.2■□□□□ 0.18
TPM4-202ENST00000344824 HMGCRP04035 888 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 CYP21A2P08686 494 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 BMP3P12645 472 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
TPM4-202ENST00000344824 ERCC3P19447 782 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms