RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 ADD3Q9UEY8 706 aaKnown RBP21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 PUF60Q9UHX1 559 aaKnown RBP21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 CCDC175P0C221 793 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 TMCO3Q6UWJ1 677 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 CLEC4GQ6UXB4 293 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 GSDMAQ96QA5 445 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 MKNK2Q9HBH9 465 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 TRIM49BA6NDI0 452 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 ERICH4A6NGS2 130 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 FILIP1LQ4L180 1135 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 TYW1BQ6NUM6 668 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 FCHSD1Q86WN1 690 aa21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 CDCA7Q9BWT1 371 aaPredicted RBP21.66■■□□□ 1.06
LYSMD4-202ENST00000344791 GRIK5Q16478 980 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 RCSD1Q6JBY9 416 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 HEATR3Q7Z4Q2 680 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 PNMA1Q8ND90 353 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 PLCH1Q4KWH8 1693 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 KRT31Q15323 416 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 NUP88Q99567 741 aaPredicted RBP21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 FHOD1Q9Y613 1164 aa21.65■■□□□ 1.06
LYSMD4-202ENST00000344791 RNF225M0QZC1 329 aaPredicted RBP21.64■■□□□ 1.06
LYSMD4-202ENST00000344791 POLR3GO15318 223 aaPredicted RBP21.64■■□□□ 1.06
LYSMD4-202ENST00000344791 GYPCP04921 128 aa21.64■■□□□ 1.06
LYSMD4-202ENST00000344791 PFKFB3Q16875 520 aaPredicted RBP21.64■■□□□ 1.06
LYSMD4-202ENST00000344791 PNMA6AP0CW24 399 aaPredicted RBP21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 INF2Q27J81 1249 aa21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 SH3RF3Q8TEJ3 882 aaPredicted RBP21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 SMARCC1Q92922 1105 aaPredicted RBP21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 IL17RBQ9NRM6 502 aa21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 COL16A1Q07092 1604 aaPredicted RBP21.64■■□□□ 1.05
LYSMD4-202ENST00000344791 ZPR1O75312 459 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 TUBB4AP04350 444 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 STAT6P42226 847 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 BMS1Q14692 1282 aaKnown RBP21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 E2F4Q16254 413 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 NELFBQ8WX92 580 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 ARGLU1Q9NWB6 273 aaPredicted RBP21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 ZNF569Q5MCW4 686 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 CDKAL1Q5VV42 579 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 BLIDQ8IZY5 108 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 TGFBRAP1Q8WUH2 860 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 KIFC2Q96AC6 838 aa21.63■■□□□ 1.05
LYSMD4-202ENST00000344791 BMP15O95972 392 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 MAPKAPK5Q8IW41 473 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 ARPP21Q9UBL0 812 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 ADGRG1Q9Y653 693 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 CCDC194A0A1B0GVG4 234 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 EFCAB8A8MWE9 144 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 MFAP3LO75121 409 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 MAP3K9P80192 1104 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 PDXDC2PQ6P474 469 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 ATP8A2Q9NTI2 1148 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 MRFAP1Q9Y605 127 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 ORC4O43929 436 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 FGRP09769 529 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 TSPY3P0CV98 308 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 TSPY8P0CW00 308 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 PAK1Q13153 545 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 TMEM60Q9H2L4 133 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 VAT1LQ9HCJ6 419 aa21.62■■□□□ 1.05
LYSMD4-202ENST00000344791 SPATA31A5Q5VU36 1347 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 SPATA31A7Q8IWB4 1347 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 KIF5BP33176 963 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 PRCPP42785 496 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 GOLGA6L9A6NEM1 432 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 RPN1P04843 607 aaKnown RBP21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 NFIXQ14938 502 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 TERF2Q15554 542 aa21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 SRRTQ9BXP5 876 aaKnown RBP21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
LYSMD4-202ENST00000344791 ROBO1Q9Y6N7 1651 aa21.6■■□□□ 1.05
LYSMD4-202ENST00000344791 UBXN1Q04323 297 aa21.6■■□□□ 1.05
LYSMD4-202ENST00000344791 PANX2Q96RD6 677 aa21.6■■□□□ 1.05
LYSMD4-202ENST00000344791 CTAGE1Q96RT6 745 aa21.6■■□□□ 1.05
LYSMD4-202ENST00000344791 TFR2Q9UP52 801 aa21.6■■□□□ 1.05
LYSMD4-202ENST00000344791 KCNJ18B7U540 433 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 KCNJ12Q14500 433 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 KIF4BQ2VIQ3 1234 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 SLF1Q9BQI6 1058 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 KIF5CO60282 957 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 LDHBP07195 334 aaKnown RBP21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 TPM1P09493 284 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 TXLNAP40222 546 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 PMS1P54277 932 aaKnown RBP21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 C8orf37Q96NL8 207 aa21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 NOL10Q9BSC4 688 aaKnown RBP21.59■■□□□ 1.05
LYSMD4-202ENST00000344791 PLA2G4AP47712 749 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 COPB1P53618 953 aaKnown RBP21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 ERVK-24P63145 666 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 GABPB1Q06547 395 aaPredicted RBP21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 TPTE2Q6XPS3 522 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 GPIHBP1Q8IV16 184 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 ZCCHC17Q9NP64 241 aaKnown RBP21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 CYTH3O43739 400 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 GTPBP6O43824 516 aaPredicted RBP21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 PBX1P40424 430 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms