RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 RPN1P04843 607 aaKnown RBP18.33■□□□□ 0.53
RDX-201ENST00000343115 ANKRD13CQ8N6S4 541 aa18.33■□□□□ 0.53
RDX-201ENST00000343115 TBCAO75347 108 aaKnown RBP18.33■□□□□ 0.53
RDX-201ENST00000343115 PRDX5P30044 214 aa18.33■□□□□ 0.53
RDX-201ENST00000343115 RAPGEF1Q13905 1077 aa18.33■□□□□ 0.53
RDX-201ENST00000343115 SLC35F6Q8N357 371 aa18.33■□□□□ 0.53
RDX-201ENST00000343115 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.53
RDX-201ENST00000343115 ENOX1Q8TC92 643 aaKnown RBP18.33■□□□□ 0.52
RDX-201ENST00000343115 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.52
RDX-201ENST00000343115 MYO6Q9UM54 1294 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 BAZ2BQ9UIF8 2168 aaKnown RBP18.33■□□□□ 0.52
RDX-201ENST00000343115 PLCG2P16885 1265 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
RDX-201ENST00000343115 TCP10Q12799 353 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 REXO1Q8N1G1 1221 aaKnown RBP18.33■□□□□ 0.52
RDX-201ENST00000343115 SLC39A2Q9NP94 309 aa18.33■□□□□ 0.52
RDX-201ENST00000343115 SHTN1A0MZ66 631 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 MFSD14BQ5SR56 506 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 SYCP3Q8IZU3 236 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 EFCAB8A8MWE9 144 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 CLCN6P51797 869 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
RDX-201ENST00000343115 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
RDX-201ENST00000343115 TRIM28Q13263 835 aaKnown RBP18.32■□□□□ 0.52
RDX-201ENST00000343115 PLS1Q14651 629 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 DCAF17Q5H9S7 520 aaPredicted RBP18.32■□□□□ 0.52
RDX-201ENST00000343115 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
RDX-201ENST00000343115 HPS5Q9UPZ3 1129 aa18.32■□□□□ 0.52
RDX-201ENST00000343115 USP17L3A6NCW0 530 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 USP17L4A6NCW7 530 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 USP17L1Q7RTZ2 530 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 C2CD5Q86YS7 1000 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 ENGASEQ8NFI3 743 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 CDCA7Q9BWT1 371 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 TEX33O43247 280 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 GTPBP6O43824 516 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 PAGE5Q96GU1 130 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 ZNF804BA4D1E1 1349 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 GTF2IP78347 998 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 CCZ1BP86790 482 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 CCZ1P86791 482 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 HERC4Q5GLZ8 1057 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 TOGARAM2Q6ZUX3 1019 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 MECOMQ03112 1051 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 GRIN1Q05586 938 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 PTPROQ16827 1216 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 E4F1Q66K89 784 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 C10orf67Q8IYJ2 551 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 NAA15Q9BXJ9 866 aaKnown RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
RDX-201ENST00000343115 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
RDX-201ENST00000343115 IFFO1Q0D2I5 559 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 IRX2Q9BZI1 471 aaPredicted RBP18.3■□□□□ 0.52
RDX-201ENST00000343115 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
RDX-201ENST00000343115 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 MAGEA1P43355 309 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 TRIM14Q14142 442 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 CALCRLQ16602 461 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 CNNM4Q6P4Q7 775 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
RDX-201ENST00000343115 KRT25Q7Z3Z0 450 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
RDX-201ENST00000343115 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 ZMYND10O75800 440 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 MRPL12P52815 198 aaKnown RBP18.29■□□□□ 0.52
RDX-201ENST00000343115 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 B4DLN1 442 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 MTF1Q14872 753 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
RDX-201ENST00000343115 ZEB2O60315 1214 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 TMEM132AQ24JP5 1023 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
RDX-201ENST00000343115 SLC44A5Q8NCS7 719 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 ERMNQ8TAM6 284 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 PKD2L1Q9P0L9 805 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 DDAH1O94760 285 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 ZNF710Q8N1W2 664 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 HSF2BPO75031 334 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 DMTNQ08495 405 aa18.28■□□□□ 0.52
RDX-201ENST00000343115 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
RDX-201ENST00000343115 KCNQ2O43526 872 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 SECISBP2LQ93073 1101 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms