RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 MMP14P50281 582 aa9.27□□□□□ -0.93
CFAP54-201ENST00000342887 STK38Q15208 465 aa9.27□□□□□ -0.93
CFAP54-201ENST00000342887 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
CFAP54-201ENST00000342887 GTPBP4Q9BZE4 634 aaKnown RBP9.27□□□□□ -0.93
CFAP54-201ENST00000342887 PCDHA6Q9UN73 950 aa9.27□□□□□ -0.93
CFAP54-201ENST00000342887 PCDHA8Q9Y5H6 950 aa9.27□□□□□ -0.93
CFAP54-201ENST00000342887 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 EVA1CP58658 441 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 SDR42E1Q8WUS8 393 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ESR2Q92731 530 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ANKRD2Q9GZV1 360 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 LEMD3Q9Y2U8 911 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 PCDHA2Q9Y5H9 948 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 RASA1P20936 1047 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 GYG1P46976 350 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 FBXO38Q6PIJ6 1188 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 GIMAP8Q8ND71 665 aaPredicted RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 NYXQ9GZU5 481 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ZNF215Q9UL58 517 aaPredicted RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 KCNJ14Q9UNX9 436 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 NIP7Q9Y221 180 aaKnown RBP eCLIP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ATF5Q9Y2D1 282 aaPredicted RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ATRNL1Q5VV63 1379 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 LONP1P36776 959 aaKnown RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 MARSP56192 900 aaKnown RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ZCWPW2Q504Y3 356 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 MIIPQ5JXC2 388 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 TTI2Q6NXR4 508 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 WDR59Q6PJI9 974 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
CFAP54-201ENST00000342887 MRIQ9BWK5 157 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 MAGEF1Q9HAY2 307 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 DNAI1Q9UI46 699 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
CFAP54-201ENST00000342887 PTPRFP10586 1907 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 IFIT3O14879 490 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 RXRAP19793 462 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 KRT2P35908 639 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 NAA30Q147X3 362 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 ASTE1Q2TB18 679 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 CREBRFQ8IUR6 639 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 CCDC51Q96ER9 411 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 A0A1W2PQJ5 194 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 SCG2P13521 617 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 MARCKSP29966 332 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 GRAPQ13588 217 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 SPECC1LQ69YQ0 1117 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 RAD9BQ6WBX8 426 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 GRAPLQ8TC17 118 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 SYMPKQ92797 1274 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 MRPL44Q9H9J2 332 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 COL11A1P12107 1806 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 MFAP3LO75121 409 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 IDH1O75874 414 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 IGHMBP2P38935 993 aaKnown RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 ERVK-24P63145 666 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 TMEM119Q4V9L6 283 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 MICU3Q86XE3 530 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 ZNF397Q8NF99 534 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-201ENST00000342887 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 SLC26A6Q9BXS9 759 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 LRRC4BQ9NT99 713 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 SUGT1Q9Y2Z0 365 aa9.25□□□□□ -0.93
CFAP54-201ENST00000342887 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 ZNF658Q5TYW1 1059 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 EPSTI1Q96J88 318 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 MPHOSPH8Q99549 860 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 CEP131Q9UPN4 1083 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 PPP2R2CQ9Y2T4 447 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 CBFA2T2O43439 604 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 GABPB1Q06547 395 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 TOGARAM2Q6ZUX3 1019 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 ANKRD18AQ8IVF6 992 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 SRRTQ9BXP5 876 aaKnown RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 APPP05067 770 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 BRD2P25440 801 aaKnown RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 PRDX5P30044 214 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
CFAP54-201ENST00000342887 NACAP1Q9BZK3 213 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 CUEDC2Q9H467 287 aa9.24□□□□□ -0.93
CFAP54-201ENST00000342887 CYP2D7A0A087X1C5 515 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 EFCAB8A8MWE9 144 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CYP7A1P22680 504 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms