RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 GREM2Q9H772 168 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 LEMD3Q9Y2U8 911 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 K7ENM7 598 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 SEC24BO95487 1268 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 FAM160B1Q5W0V3 765 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 FANCBQ8NB91 859 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 CSRNP1Q96S65 589 aa16.58■□□□□ 0.25
UBE3B-202ENST00000342494 SEMA3EO15041 775 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 XRCC5P13010 732 aaKnown RBP16.58■□□□□ 0.24
UBE3B-202ENST00000342494 MNAT1P51948 309 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 TAOK1Q7L7X3 1001 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 NEK8Q86SG6 692 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE3B-202ENST00000342494 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-202ENST00000342494 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 TMTC1Q8IUR5 882 aa16.58■□□□□ 0.24
UBE3B-202ENST00000342494 ZNF526Q8TF50 670 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-202ENST00000342494 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 OSBPP22059 807 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 IFRD2Q12894 506 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 MYOCDQ8IZQ8 938 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 CCDC89Q8N998 374 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 NUCKS1Q9H1E3 243 aaKnown RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 OATP04181 439 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 USP44Q9H0E7 712 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 VIMP08670 466 aaKnown RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 LRRIQ4A6NIV6 560 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 EBAG9O00559 213 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 LGSNQ5TDP6 509 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 GOLGA5Q8TBA6 731 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 LARSQ9P2J5 1176 aaKnown RBP16.57■□□□□ 0.24
UBE3B-202ENST00000342494 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
UBE3B-202ENST00000342494 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 FYB2Q5VWT5 728 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 BSPRYQ5W0U4 402 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
UBE3B-202ENST00000342494 PDE8BO95263 885 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 SCG2P13521 617 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 ERCC6LQ2NKX8 1250 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-202ENST00000342494 DMP1Q13316 513 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-202ENST00000342494 CUL4BQ13620 913 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.247e-6■■■■■ 33.4
UBE3B-202ENST00000342494 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 INSRP06213 1382 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 EVCP57679 992 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 SND1Q7KZF4 910 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE3B-202ENST00000342494 HDXQ7Z353 690 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 AP5M1Q9H0R1 490 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 C1orf112Q9NSG2 853 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 ZBTB1Q9Y2K1 713 aa16.56■□□□□ 0.24
UBE3B-202ENST00000342494 STAT1P42224 750 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 USP14P54578 494 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 ARMC9Q7Z3E5 817 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 NOSTRINQ8IVI9 506 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-202ENST00000342494 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 DTNBO60941 627 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 HPDP32754 393 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-202ENST00000342494 RPS6KA1Q15418 735 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 GALNT17Q6IS24 598 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 TRMT44Q8IYL2 757 aaKnown RBP16.55■□□□□ 0.24
UBE3B-202ENST00000342494 SPICE1Q8N0Z3 855 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 DDAH1O94760 285 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms