RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 TUBE1Q9UJT0 475 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 LDHBP07195 334 aaKnown RBP14.13□□□□□ -0.15
LMX1A-202ENST00000342310 KRT31Q15323 416 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 SGMS1Q86VZ5 419 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 LRRC47Q8N1G4 583 aaKnown RBP14.13□□□□□ -0.15
LMX1A-202ENST00000342310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.13□□□□□ -0.15
LMX1A-202ENST00000342310 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
LMX1A-202ENST00000342310 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 TCRBV5S4A2TA0A5A2 114 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 SLFN14P0C7P3 912 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 SLURP2P0DP57 97 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 KIF5BP33176 963 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 HNRNPH2P55795 449 aaKnown RBP14.12□□□□□ -0.15
LMX1A-202ENST00000342310 TRIM28Q13263 835 aaKnown RBP14.12□□□□□ -0.15
LMX1A-202ENST00000342310 SPATA1Q5VX52 437 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 CTR9Q6PD62 1173 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 REXO1L1PQ8IX06 675 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 NLRC4Q9NPP4 1024 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 AKR1B10O60218 316 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 RFC4P35249 363 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 TTC19Q6DKK2 380 aaPredicted RBP14.12□□□□□ -0.15
LMX1A-202ENST00000342310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMX1A-202ENST00000342310 FAM84BQ96KN1 310 aaPredicted RBP14.12□□□□□ -0.15
LMX1A-202ENST00000342310 CAPN2P17655 700 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 EPS15P42566 896 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 NELFCDQ8IXH7 590 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 EXOC1Q9NV70 894 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 CALCOCO1Q9P1Z2 691 aa14.12□□□□□ -0.15
LMX1A-202ENST00000342310 KLK7P49862 253 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 TBC1D9BQ66K14 1250 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 HSD3B7Q9H2F3 369 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.15
LMX1A-202ENST00000342310 HPSEQ9Y251 543 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 PARP3Q9Y6F1 533 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 RTL9Q8NET4 1388 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 STX10O60499 249 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 CCDC181Q5TID7 509 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 ENOX1Q8TC92 643 aaKnown RBP14.11□□□□□ -0.15
LMX1A-202ENST00000342310 STAG1Q8WVM7 1258 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 PSMA7O14818 248 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 PRCPP42785 496 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 TYW1BQ6NUM6 668 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 VGLL2Q8N8G2 317 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
LMX1A-202ENST00000342310 RPN1P04843 607 aaKnown RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 DPYDQ12882 1025 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 BLIDQ8IZY5 108 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 SMCR8Q8TEV9 937 aaPredicted RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 COA7Q96BR5 231 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 RNF26Q9BY78 433 aaPredicted RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 FAM107BQ9H098 131 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 RSPH14Q9UHP6 348 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 ACTN4O43707 911 aaKnown RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 GABPB1Q06547 395 aaPredicted RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 TCP10Q12799 353 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 DCP1AQ9NPI6 582 aaPredicted RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 CACNA1FO60840 1977 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 SLC16A2P36021 539 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 COPB1P53618 953 aaKnown RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 TCERG1LQ5VWI1 586 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 CNGA4Q8IV77 575 aa14.1□□□□□ -0.15
LMX1A-202ENST00000342310 NOC4LQ9BVI4 516 aaKnown RBP14.1□□□□□ -0.15
LMX1A-202ENST00000342310 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 N4BP1O75113 896 aaKnown RBP14.09□□□□□ -0.15
LMX1A-202ENST00000342310 ERLIN1O75477 346 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 SCNN1DP51172 638 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 TRIM65Q6PJ69 517 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 TPTE2Q6XPS3 522 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 LEKR1Q6ZMV7 388 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 SH3RF3Q8TEJ3 882 aaPredicted RBP14.09□□□□□ -0.15
LMX1A-202ENST00000342310 SYCP1Q15431 976 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 SPA17Q15506 151 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 TEX11Q8IYF3 940 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
LMX1A-202ENST00000342310 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 TMEM60Q9H2L4 133 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 SMARCAL1Q9NZC9 954 aa14.09□□□□□ -0.15
LMX1A-202ENST00000342310 EFCAB8A8MWE9 144 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 TADA3O75528 432 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 UFL1O94874 794 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 PARP10Q53GL7 1025 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 CCDC42Q96M95 316 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.15
LMX1A-202ENST00000342310 MST1RQ04912 1400 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 JCADQ9P266 1359 aa14.08□□□□□ -0.15
LMX1A-202ENST00000342310 OVOS2A0A0G2JMS6 1433 aa14.08□□□□□ -0.16
LMX1A-202ENST00000342310 SMCO2A6NFE2 343 aa14.08□□□□□ -0.16
LMX1A-202ENST00000342310 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
LMX1A-202ENST00000342310 FANCGO15287 622 aa14.08□□□□□ -0.16
LMX1A-202ENST00000342310 BUB1O43683 1085 aa14.08□□□□□ -0.16
LMX1A-202ENST00000342310 FCER1AP12319 257 aa14.08□□□□□ -0.16
LMX1A-202ENST00000342310 SNAP25P60880 206 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms