RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.882e-11■□□□□ 8.7
TRA2B-202ENST00000342294 TSEN34Q9BSV6 310 aaKnown RBP20.52■□□□□ 0.88
TRA2B-202ENST00000342294 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
TRA2B-202ENST00000342294 BCAR3O75815 825 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 TIMP1P01033 207 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 PGK2P07205 417 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 RASIP1Q5U651 963 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 C16orf59Q7L2K0 433 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 SLC44A5Q8NCS7 719 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 TBX21Q9UL17 535 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 TMX2Q9Y320 296 aa20.51■□□□□ 0.87
TRA2B-202ENST00000342294 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 AKR1A1P14550 325 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 ACLYP53396 1101 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 CCSAPQ6IQ19 270 aaPredicted RBP20.5■□□□□ 0.87
TRA2B-202ENST00000342294 RIOX2Q8IUF8 465 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 SPICE1Q8N0Z3 855 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 CLUAP1Q96AJ1 413 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 LENG1Q96BZ8 264 aaPredicted RBP20.5■□□□□ 0.87
TRA2B-202ENST00000342294 ASB2Q96Q27 587 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 MMP19Q99542 508 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 VCPKMTQ9H867 229 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
TRA2B-202ENST00000342294 MAGEB6P1A0A0J9YX57 407 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 MFSD5Q6N075 450 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 CLEC10AQ8IUN9 316 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 KLHDC9Q8NEP7 349 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 PBX4Q9BYU1 374 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 STARD7Q9NQZ5 370 aa20.49■□□□□ 0.87
TRA2B-202ENST00000342294 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
TRA2B-202ENST00000342294 PBX2P40425 430 aa20.48■□□□□ 0.87
TRA2B-202ENST00000342294 TMEM240Q5SV17 173 aa20.48■□□□□ 0.87
TRA2B-202ENST00000342294 NUP133Q8WUM0 1156 aa20.48■□□□□ 0.87
TRA2B-202ENST00000342294 GAS2L1Q99501 681 aaPredicted RBP20.48■□□□□ 0.87
TRA2B-202ENST00000342294 CRNKL1Q9BZJ0 848 aaKnown RBP20.48■□□□□ 0.87
TRA2B-202ENST00000342294 THEGQ9P2T0 379 aa20.48■□□□□ 0.87
TRA2B-202ENST00000342294 MOXD2PA6NHM9 499 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 GRXCR1A8MXD5 290 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 CYP2D6P10635 497 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 CDK7P50613 346 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 KCTD2Q14681 263 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 ADAMTS19Q8TE59 1207 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 DCP1AQ9NPI6 582 aaPredicted RBP20.47■□□□□ 0.87
TRA2B-202ENST00000342294 SWAP70Q9UH65 585 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 SYNRGQ9UMZ2 1314 aa20.47■□□□□ 0.87
TRA2B-202ENST00000342294 AKR1B1P15121 316 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 ICA1Q05084 483 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 ADGRE1Q14246 886 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 KCNA10Q16322 511 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 REPS2Q8NFH8 660 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
TRA2B-202ENST00000342294 SH2D4AQ9H788 454 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 FBXO28Q9NVF7 368 aa20.46■□□□□ 0.87
TRA2B-202ENST00000342294 ZNF214Q9UL59 606 aaPredicted RBP20.46■□□□□ 0.87
TRA2B-202ENST00000342294 ZNFX1Q9P2E3 1918 aaKnown RBP20.46■□□□□ 0.87
TRA2B-202ENST00000342294 PDE6AP16499 860 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 PLA2G5P39877 138 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 STAT3P40763 770 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
TRA2B-202ENST00000342294 PPIGQ13427 754 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRA2B-202ENST00000342294 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
TRA2B-202ENST00000342294 MSL3Q8N5Y2 521 aaKnown RBP20.45■□□□□ 0.86
TRA2B-202ENST00000342294 SDR42E1Q8WUS8 393 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 DYNLL2Q96FJ2 89 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 ELP1O95163 1332 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 NCOR1O75376 2440 aa20.45■□□□□ 0.86
TRA2B-202ENST00000342294 VWA5AO00534 786 aa20.44■□□□□ 0.86
TRA2B-202ENST00000342294 SNAI1O95863 264 aaPredicted RBP20.44■□□□□ 0.86
TRA2B-202ENST00000342294 CST5P28325 142 aaPredicted RBP20.44■□□□□ 0.86
TRA2B-202ENST00000342294 SLC9C2Q5TAH2 1124 aa20.44■□□□□ 0.86
TRA2B-202ENST00000342294 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
TRA2B-202ENST00000342294 C1orf115Q9H7X2 142 aa20.44■□□□□ 0.86
TRA2B-202ENST00000342294 FAM184BQ9ULE4 1060 aa20.44■□□□□ 0.86
TRA2B-202ENST00000342294 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 NAV1Q8NEY1 1877 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 CHD9Q3L8U1 2897 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 MYADML2A6NDP7 307 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 CSF2RAP15509 400 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 COPB2P35606 906 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 MAMDC4Q6UXC1 1216 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 ZNF365Q70YC5 407 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 CCDC17Q96LX7 622 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 UHRF1Q96T88 793 aaPredicted RBP20.43■□□□□ 0.86
TRA2B-202ENST00000342294 PPP1R9AQ9ULJ8 1098 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 SYNGAP1Q96PV0 1343 aa20.43■□□□□ 0.86
TRA2B-202ENST00000342294 DUSP11O75319 330 aaKnown RBP20.42■□□□□ 0.86
TRA2B-202ENST00000342294 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
TRA2B-202ENST00000342294 TTF1Q15361 905 aaPredicted RBP20.42■□□□□ 0.86
TRA2B-202ENST00000342294 LCORLQ8N3X6 602 aa20.42■□□□□ 0.86
TRA2B-202ENST00000342294 MROH7Q68CQ1 1323 aa20.42■□□□□ 0.86
TRA2B-202ENST00000342294 ZNF532Q9HCE3 1301 aa20.42■□□□□ 0.86
TRA2B-202ENST00000342294 DNAJC25-GNG10A0A024R161 153 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms