RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 PSDA5PKW4 1024 aaPredicted RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 CFAP100Q494V2 611 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 JRKLQ9Y4A0 524 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 KIF5BP33176 963 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 SATB1Q01826 763 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 PNMA1Q8ND90 353 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
PBX3-201ENST00000342287 TAOK3Q9H2K8 898 aa16.77■□□□□ 0.28
PBX3-201ENST00000342287 IRF6O14896 467 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.27
PBX3-201ENST00000342287 GUCY1A2P33402 732 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 PTGER2P43116 358 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 FUT2Q10981 343 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 HDAC9Q9UKV0 1011 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 STX8Q9UNK0 236 aa16.77■□□□□ 0.27
PBX3-201ENST00000342287 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
PBX3-201ENST00000342287 FBXO38Q6PIJ6 1188 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 GMLQ99445 158 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 ADAMTSL1Q8N6G6 1762 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 UBE2Q2LH0YL09 131 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 PLEKHA8P1O95397 391 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 CACNB3P54284 484 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 EHD4Q9H223 541 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
PBX3-201ENST00000342287 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 JDP2Q8WYK2 163 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 TCP10Q12799 353 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 PRMT6Q96LA8 375 aaPredicted RBP16.75■□□□□ 0.27
PBX3-201ENST00000342287 TDRD3Q9H7E2 651 aaKnown RBP16.75■□□□□ 0.27
PBX3-201ENST00000342287 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 V9GY48 417 aaPredicted RBP16.75■□□□□ 0.27
PBX3-201ENST00000342287 COL4A5P29400 1685 aa16.75■□□□□ 0.27
PBX3-201ENST00000342287 GOLGA6L4A6NEF3 574 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 GNL2Q13823 731 aaKnown RBP16.74■□□□□ 0.27
PBX3-201ENST00000342287 AGBL3Q8NEM8 1001 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 KIF28PB7ZC32 967 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 POLR3GO15318 223 aaPredicted RBP16.74■□□□□ 0.27
PBX3-201ENST00000342287 XBP1P17861 261 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
PBX3-201ENST00000342287 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
PBX3-201ENST00000342287 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
PBX3-201ENST00000342287 GOLGA6L1Q8N7Z2 621 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
PBX3-201ENST00000342287 MMP1P03956 469 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 NOVP48745 357 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 GNAQP50148 359 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 E2F4Q16254 413 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
PBX3-201ENST00000342287 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 ENTPD3O75355 529 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
PBX3-201ENST00000342287 SHMT1P34896 483 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 CXCL9Q07325 125 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 GRM4Q14833 912 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 PKN1Q16512 942 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
PBX3-201ENST00000342287 RNF217Q8TC41 542 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
PBX3-201ENST00000342287 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 NFKBIEO00221 500 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 DLGAP5Q15398 846 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 TXLNBQ8N3L3 684 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
PBX3-201ENST00000342287 PSME4Q14997 1843 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 DDTLA6NHG4 134 aaPredicted RBP16.72■□□□□ 0.27
PBX3-201ENST00000342287 AKR1B1P15121 316 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 ELF2Q15723 593 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
PBX3-201ENST00000342287 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 TMOD2Q9NZR1 351 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 MAD2L2Q9UI95 211 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 CEP120Q8N960 986 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
PBX3-201ENST00000342287 DONSONQ9NYP3 566 aa16.72■□□□□ 0.27
PBX3-201ENST00000342287 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
PBX3-201ENST00000342287 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
PBX3-201ENST00000342287 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
PBX3-201ENST00000342287 DEF6Q9H4E7 631 aa16.71■□□□□ 0.27
PBX3-201ENST00000342287 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms