RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 CETN3O15182 167 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 MMP1P03956 469 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 IQCB1Q15051 598 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 RPL13P26373 211 aaKnown RBP16.48■□□□□ 0.23
RRP1B-201ENST00000340648 CCZ1BP86790 482 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 CCZ1P86791 482 aaPredicted RBP16.48■□□□□ 0.23
RRP1B-201ENST00000340648 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
RRP1B-201ENST00000340648 KRT25Q7Z3Z0 450 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 TFAP4Q01664 338 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 INF2Q27J81 1249 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
RRP1B-201ENST00000340648 GREM2Q9H772 168 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 SPDYE3A6NKU9 549 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
RRP1B-201ENST00000340648 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 A0A1B0GUA9 196 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 CIAO1O76071 339 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
RRP1B-201ENST00000340648 CLNS1AP54105 237 aaKnown RBP16.47■□□□□ 0.23
RRP1B-201ENST00000340648 EPB41P11171 864 aaKnown RBP16.47■□□□□ 0.23
RRP1B-201ENST00000340648 BCAMP50895 628 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 ZNF804AQ7Z570 1209 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 CCDC50Q8IVM0 306 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 PANX2Q96RD6 677 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 ATP6V0A2Q9Y487 856 aa16.47■□□□□ 0.23
RRP1B-201ENST00000340648 MYO1CO00159 1063 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
RRP1B-201ENST00000340648 TFCP2L1Q9NZI6 479 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
RRP1B-201ENST00000340648 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 MTUS1Q9ULD2 1270 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 CTIFO43310 598 aaKnown RBP16.46■□□□□ 0.23
RRP1B-201ENST00000340648 SCG2P13521 617 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 C2orf54Q08AI8 447 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 CALCRLQ16602 461 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 RESP18Q5W5W9 173 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
RRP1B-201ENST00000340648 EPSTI1Q96J88 318 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 TUBGCP2Q9BSJ2 902 aa16.46■□□□□ 0.23
RRP1B-201ENST00000340648 E4F1Q66K89 784 aaPredicted RBP16.46■□□□□ 0.22
RRP1B-201ENST00000340648 PEX26Q7Z412 305 aa16.46■□□□□ 0.22
RRP1B-201ENST00000340648 LSM14BQ9BX40 385 aaKnown RBP16.46■□□□□ 0.22
RRP1B-201ENST00000340648 IKBKGQ9Y6K9 419 aa16.46■□□□□ 0.22
RRP1B-201ENST00000340648 KCNK3O14649 394 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 ADD2P35612 726 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 NAP1L3Q99457 506 aaPredicted RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 SLC39A2Q9NP94 309 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 SETBP1Q9Y6X0 1596 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 TECP42680 631 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 GUCY2DQ02846 1103 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 CDC25AP30304 524 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 BICD1Q96G01 975 aa16.45■□□□□ 0.22
RRP1B-201ENST00000340648 CNOT6LQ96LI5 555 aaKnown RBP16.45■□□□□ 0.22
RRP1B-201ENST00000340648 MFAP3LO75121 409 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 DESP17661 470 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 TEX11Q8IYF3 940 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 BAIAP2L1Q9UHR4 511 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 ADGRB3O60242 1522 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 RFC4P35249 363 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 ZSWIM5Q9P217 1185 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 ZBTB22O15209 634 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 IFNAR1P17181 557 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 MRPL12P52815 198 aaKnown RBP16.44■□□□□ 0.22
RRP1B-201ENST00000340648 C6orf163Q5TEZ5 329 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 ANKRD2Q9GZV1 360 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 SRPRBQ9Y5M8 271 aaKnown RBP16.44■□□□□ 0.22
RRP1B-201ENST00000340648 SPOPO43791 374 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 PDE8BO95263 885 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 SETDB1Q15047 1291 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 EFCAB13Q8IY85 973 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 IQCDQ96DY2 449 aa16.44■□□□□ 0.22
RRP1B-201ENST00000340648 PRKAB2O43741 272 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 PARP10Q53GL7 1025 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
RRP1B-201ENST00000340648 NDUFA10O95299 355 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 CASP1P29466 404 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 CXCR5P32302 372 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 DPF2Q92785 391 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 PAGE5Q96GU1 130 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 RNF26Q9BY78 433 aaPredicted RBP16.43■□□□□ 0.22
RRP1B-201ENST00000340648 NKIRAS1Q9NYS0 192 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 FLOT1O75955 427 aa16.43■□□□□ 0.22
RRP1B-201ENST00000340648 RASSF7Q02833 373 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 264.5 ms