RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 NFE2L3Q9Y4A8 694 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 SRPRBQ9Y5M8 271 aaKnown RBP8.54□□□□□ -1.04
HIPK1-201ENST00000340480 GRM1Q13255 1194 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 DLGAP5Q15398 846 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 PDLIM2Q96JY6 352 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 IL25Q9H293 177 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 KANSL2Q9H9L4 492 aa8.54□□□□□ -1.04
HIPK1-201ENST00000340480 SMCO2A6NFE2 343 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 LRP10Q7Z4F1 713 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 FOXP4Q8IVH2 680 aaPredicted RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 KIF4BQ2VIQ3 1234 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 CCDC24Q8N4L8 307 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 PPIP5K2O43314 1243 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 TRIM37O94972 964 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 NDUFA8P51970 172 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 FCHSD1Q86WN1 690 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 BPIFA3Q9BQP9 254 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 CLIC4Q9Y696 253 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 NEDD4P46934 1319 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 TTLL1O95922 423 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 AKR1B15C9JRZ8 316 aaPredicted RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 DKC1O60832 514 aaKnown RBP eCLIP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 URI1O94763 535 aaPredicted RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 PTPREP23469 700 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 ISM2Q6H9L7 571 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 BIN2Q9UBW5 565 aaPredicted RBP8.53□□□□□ -1.04
HIPK1-201ENST00000340480 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
HIPK1-201ENST00000340480 TMCO3Q6UWJ1 677 aa8.52□□□□□ -1.04
HIPK1-201ENST00000340480 LUC7L2Q9Y383 392 aaKnown RBP8.52□□□□□ -1.04
HIPK1-201ENST00000340480 USP54Q70EL1 1684 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CALCRLQ16602 461 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 H0YHG0 523 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CKAP4Q07065 602 aaKnown RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 HS2ST1Q7LGA3 356 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CABP7Q86V35 215 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 VEZTQ9HBM0 779 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 PHRF1Q9P1Y6 1649 aaKnown RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 TXNRD1Q16881 649 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CCDC117Q8IWD4 279 aaPredicted RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 GNG11P61952 73 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 NCBP1Q09161 790 aaKnown RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 CYB5R4Q7L1T6 521 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 TMTC1Q8IUR5 882 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 RTKN2Q8IZC4 609 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 NEDD1Q8NHV4 660 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 KCNG1Q9UIX4 513 aa8.52□□□□□ -1.05
HIPK1-201ENST00000340480 RGPD8O14715 1765 aaPredicted RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 COL14A1Q05707 1796 aaKnown RBP8.52□□□□□ -1.05
HIPK1-201ENST00000340480 SLU7O95391 586 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PFKFB3Q16875 520 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SPATA1Q5VX52 437 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SLFN12Q8IYM2 578 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 FNBP4Q8N3X1 1017 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 BAG1Q99933 345 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 RABGAP1Q9Y3P9 1069 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CCNT1O60563 726 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PRDX5P30044 214 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SPECC1LQ69YQ0 1117 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 ZNF771Q7L3S4 317 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 ELOA2Q8IYF1 753 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 ENAHQ8N8S7 591 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 H7C1D1 291 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 KRT86O43790 486 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 AKR1B10O60218 316 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 U2AF2P26368 475 aaKnown RBP eCLIP8.51□□□□□ -1.053e-6■■■□□ 16.1
HIPK1-201ENST00000340480 PAFAH1B1P43034 410 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PPP4CP60510 307 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 ICA1Q05084 483 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PDE4DQ08499 809 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 GRM4Q14833 912 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CERKLQ49MI3 558 aaPredicted RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CWC15Q9P013 229 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SMARCA1P28370 1054 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 RESP18Q5W5W9 173 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CTR9Q6PD62 1173 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 TRMT1Q9NXH9 659 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PTGDRQ13258 359 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 ENOX1Q8TC92 643 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 IGDCC4Q8TDY8 1250 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 PCDHA5Q9Y5H7 936 aa8.51□□□□□ -1.05
HIPK1-201ENST00000340480 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
HIPK1-201ENST00000340480 VWA3BQ502W6 1294 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms