RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 PUM3Q15397 648 aaKnown RBP13.53□□□□□ -0.24
CCDC144CP-201ENST00000340196 LRP2BPQ9P2M1 347 aa13.53□□□□□ -0.24
CCDC144CP-201ENST00000340196 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
CCDC144CP-201ENST00000340196 CTAGE9A4FU28 777 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 MCM7P33993 719 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 PPARAQ07869 468 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 PTGDRQ13258 359 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 IL17AQ16552 155 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 ABHD10Q9NUJ1 306 aa13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 REXO2Q9Y3B8 237 aaKnown RBP13.52□□□□□ -0.24
CCDC144CP-201ENST00000340196 MYH8P13535 1937 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 PP2D1A8MPX8 630 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 LPIN2Q92539 896 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 WASF1Q92558 559 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 RABEP2Q9H5N1 569 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 L1RE1Q9UN81 338 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 MTMR7Q9Y216 660 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 RREB1Q92766 1687 aa13.52□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYO1CO00159 1063 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 FGFR2P21802 821 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 PIK3AP1Q6ZUJ8 805 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 KRT23Q9C075 422 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 CYP7A1P22680 504 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 KRT9P35527 623 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 CASP8Q14790 479 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 NPY5RQ15761 445 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 USP21Q9UK80 565 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
CCDC144CP-201ENST00000340196 KLK7P49862 253 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 FKBP15Q5T1M5 1219 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 SH3RF1Q7Z6J0 888 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 KCNG1Q9UIX4 513 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 ATP8B1O43520 1251 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYO1BO43795 1136 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 ERCC3P19447 782 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 HSPA1LP34931 641 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 KRT2P35908 639 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 GYG1P46976 350 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 FAM47AQ5JRC9 791 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
CCDC144CP-201ENST00000340196 ZNF185O15231 689 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 GPS2Q13227 327 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 BRD3Q15059 726 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 SEC23AQ15436 765 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 ALX1Q15699 326 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 DUSP10Q9Y6W6 482 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 PDE8AO60658 829 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 ATP1A1P05023 1023 aaKnown RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 UBXN1Q04323 297 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 FUT2Q10981 343 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 SUSD4Q5VX71 490 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 PHF20Q9BVI0 1012 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 ANKRD36CQ5JPF3 1778 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYBL2P10244 700 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 SLC5A1P13866 664 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 FAM193AP78312 1265 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 HDXQ7Z353 690 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 PROM2Q8N271 834 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 MSANTD4Q8NCY6 345 aa13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
CCDC144CP-201ENST00000340196 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 KCNJ18B7U540 433 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 PRCPP42785 496 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 KCNJ12Q14500 433 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 KCTD19Q17RG1 926 aaPredicted RBP13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms