RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 A0A087X0B3 334 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 A0A1B0GTH6 734 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FOXN1O15353 648 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 EVX2Q03828 476 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SPATA1Q5VX52 437 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CCDC12Q8WUD4 166 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MKNK2Q9HBH9 465 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SERPINC1P01008 464 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CDKAL1Q5VV42 579 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CTAGE1Q96RT6 745 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 COA1Q9GZY4 146 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FLT1P17948 1338 aa12.19□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NPHP1O15259 732 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 UFL1O94874 794 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 HOXA7P31268 230 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 BTDP43251 543 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NR1I3Q14994 352 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MED15Q96RN5 788 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 WNT7AO00755 349 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FMR1Q06787 632 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SPECC1Q5M775 1068 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 AK8Q96MA6 479 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RMND1Q9NWS8 449 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ITIH6Q6UXX5 1313 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GOLGA6L9A6NEM1 432 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 STXBP3O00186 592 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ARHGAP6O43182 974 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CDK8P49336 464 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GABPAQ06546 454 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GRIK5Q16478 980 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TMEM139Q8IV31 216 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DPF2Q92785 391 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CYTH3O43739 400 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 STX10O60499 249 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FECHP22830 423 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PBX1P40424 430 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DDR1Q08345 913 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MRIQ9BWK5 157 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ATP6V0A2Q9Y487 856 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZNF646O15015 1829 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PHLPP2Q6ZVD8 1323 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MYH8P13535 1937 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 IGKV6D-41A0A0C4DH26 115 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 KCNB1Q14721 858 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZNF174Q15697 407 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DHX58Q96C10 678 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 POLLQ9UGP5 575 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
TRAF3IP2-201ENST00000340026 USP27XA6NNY8 438 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TXLNAP40222 546 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FKBP1AP62942 108 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 IL17AQ16552 155 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 KRT25Q7Z3Z0 450 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DYNLL2Q96FJ2 89 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SPAG1Q07617 926 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms