RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SRGAP2O75044 1071 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 KRT83P78385 493 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 PRPF4BQ13523 1007 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 CCDC43Q96MW1 224 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 KRT31Q15323 416 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TFR2Q9UP52 801 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 EPN1Q9Y6I3 576 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 C2CD5Q86YS7 1000 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 ALS2CR12Q96Q35 445 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 CDC23Q9UJX2 597 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 WTIPA6NIX2 430 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 ZEB2O60315 1214 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 SLC44A5Q8NCS7 719 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TRAF5O00463 557 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TACC1O75410 805 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 PTPAQ15257 358 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 CABP7Q86V35 215 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 LUC7LQ9NQ29 371 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-201ENST00000339861 ERCC5P28715 1186 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 CXCR5P32302 372 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 GNAQP50148 359 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 TTC19Q6DKK2 380 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 TCEAL9Q9UHQ7 104 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 MYO6Q9UM54 1294 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 GSDMAQ96QA5 445 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 TUBE1Q9UJT0 475 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 GOLGA6L10A6NI86 522 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 LDHCP07864 332 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 AGXT2Q9BYV1 514 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 SUGCTQ9HAC7 445 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 HDAC6Q9UBN7 1215 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 FAN1Q9Y2M0 1017 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 CPDO75976 1380 aa12.41□□□□□ -0.42
SEMA4D-201ENST00000339861 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 ZFYVE27Q5T4F4 411 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 TC2NQ8N9U0 490 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 SPAG5Q96R06 1193 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 SMCO2A6NFE2 343 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 ATP2C2O75185 946 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 TADA3O75528 432 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 CSF1RP07333 972 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 TOB1P50616 345 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 CT47A1Q5JQC4 288 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 CC2D1AQ6P1N0 951 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 TRIM10Q9UDY6 481 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 BUB1O43683 1085 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 LRRC41Q15345 812 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 KRT79Q5XKE5 535 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 CELF1Q92879 486 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-201ENST00000339861 KLRF2D3W0D1 207 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 MFAP3LO75121 409 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 ST5P78524 1137 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 MECOMQ03112 1051 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 RAD9BQ6WBX8 426 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms